Os07g0421300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Alpha glucosidase-like protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0421300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Alpha glucosidase-like protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 256.06 | 0.752 | 3.43 | -0.209 | 0.39 | -0.402 | 0.449 | -3.03 | -0.0941 | 22.5 | 69.33 | 644 | -- | -- |
| 266.06 | 0.76 | 3.39 | -0.0671 | 0.392 | -0.519 | -0.177 | -- | -0.0412 | 22.5 | 69.9 | 645 | -- | -- |
| 256.57 | 0.746 | 3.43 | -0.202 | 0.374 | -0.362 | -- | -2.85 | -0.0968 | 22.8 | 68.83 | 639 | -- | -- |
| 262.88 | 0.755 | 3.38 | -0.041 | 0.398 | -0.632 | -- | -- | 0.0538 | 22.9 | 72 | 2050 | -- | -- |
| 263.3 | 0.756 | 3.41 | -0.206 | -- | -0.156 | -- | -2.95 | -0.0828 | -- | 68.89 | 530 | -- | -- |
| 271.04 | 0.772 | 3.39 | -0.0977 | 0.337 | -- | 0.294 | -- | -0.0599 | 1.77 | -- | -- | -- | -- |
| 271.32 | 0.771 | 3.39 | -0.107 | 0.337 | -- | -- | -- | -0.0611 | 1.41 | -- | -- | -- | -- |
| 265.67 | 0.759 | 3.38 | -0.224 | -- | -0.932 | -- | -- | 0.0492 | -- | 86.87 | 1725 | -- | -- |
| 262.71 | 0.755 | 3.38 | -- | 0.371 | -0.656 | -- | -- | 0.0394 | 23.2 | 71 | 2052 | -- | -- |
| 278.29 | 0.78 | 3.39 | -0.0932 | -- | -- | -- | -- | -0.0539 | -- | -- | -- | -- | -- |
| 271.62 | 0.771 | 3.39 | -- | 0.335 | -- | -- | -- | -0.0492 | 1.4 | -- | -- | -- | -- |
| 266.77 | 0.761 | 3.36 | -- | -- | -0.885 | -- | -- | 0.0711 | -- | 86.67 | 1688 | -- | -- |
| 278.52 | 0.779 | 3.39 | -- | -- | -- | -- | -- | -0.0436 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 246.99 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 2 | 247.22 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 3 | 247.58 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 4 | 247.85 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 5 | 247.85 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 8 | 248.39 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 9 | 248.49 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 10 | 248.71 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 6 |
| 11 | 248.79 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 8 | 3 |
| 16 | 249.02 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 19 | 249.07 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 20 | 249.12 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 27 | 249.38 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 28 | 249.38 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 31 | 249.44 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 8 |
| 35 | 249.53 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 39 | 249.64 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 40 | 249.66 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 50 | 249.81 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 9 | 1 |
| 52 | 249.82 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 3 | 4 |
| 53 | 249.84 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 5 |
| 56 | 249.86 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 7 | 7 |
| 85 | 250.35 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 5 | 9 |
| 89 | 250.41 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 132 | 250.78 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 133 | 250.78 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 140 | 250.84 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 146 | 250.91 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 22 | 8 |
| 153 | 250.94 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 166 | 251.04 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 167 | 251.04 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 206 | 251.37 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 239 | 251.61 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 281 | 251.84 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 292 | 251.92 | humidity | 80.0 | 1440 | < th | dose independent | sin | 4 | NA |
| 321 | 252.07 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 13 |
| 340 | 252.19 | humidity | 80.0 | 1440 | > th | dose independent | sin | 4 | NA |
| 343 | 252.20 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 373 | 252.42 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 375 | 252.42 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 393 | 252.50 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 13 |
| 401 | 252.53 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 4 | NA |
| 404 | 252.55 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 13 |
| 406 | 252.55 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 13 |
| 431 | 252.69 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 436 | 252.71 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 453 | 252.79 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 2 | 9 |
| 459 | 252.84 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 477 | 252.92 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 16 |
| 481 | 252.92 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 16 |
| 482 | 252.93 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 483 | 252.94 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 16 |
| 522 | 253.05 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 531 | 253.09 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 539 | 253.10 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 552 | 253.12 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 6 |
| 565 | 253.17 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 571 | 253.18 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 574 | 253.18 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 8 |
| 586 | 253.22 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 604 | 253.28 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 638 | 253.38 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 9 | 1 |
| 650 | 253.42 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 14 | 20 |
| 664 | 253.46 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 8 |
| 792 | 253.72 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 17 |
| 808 | 253.76 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 12 | 18 |
| 896 | 253.97 | wind | 9.0 | 14400 | < th | dose independent | rect. | 7 | 4 |
| 911 | 253.99 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 12 | 5 |
| 926 | 254.02 | wind | 3.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 943 | 254.08 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 999 | 254.21 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 23 | 1 |