Os07g0420700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycoside hydrolase, family 31 protein.
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Os07g0420700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycoside hydrolase, family 31 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29.66 | 0.256 | 10.3 | 0.512 | 0.763 | -0.773 | -1.08 | -0.567 | 0.0817 | 22.5 | 29.65 | 713 | -- | -- |
| 30.16 | 0.256 | 10.3 | 0.417 | 0.766 | -0.781 | -0.998 | -- | 0.0867 | 22.5 | 56.23 | 727 | -- | -- |
| 33.66 | 0.27 | 10.3 | 0.469 | 0.799 | -0.722 | -- | -0.0258 | 0.0667 | 22.5 | 29.01 | 613 | -- | -- |
| 33.51 | 0.27 | 10.3 | 0.435 | 0.806 | -0.762 | -- | -- | 0.0514 | 22.8 | 29.37 | 558 | -- | -- |
| 65.02 | 0.376 | 10.3 | 0.23 | -- | -1.37 | -- | 0.471 | -0.0211 | -- | 61.95 | 774 | -- | -- |
| 37.92 | 0.289 | 10.3 | 0.617 | 0.928 | -- | -0.955 | -- | 0.207 | 22.2 | -- | -- | -- | -- |
| 41.56 | 0.302 | 10.3 | 0.654 | 0.933 | -- | -- | -- | 0.21 | 22.2 | -- | -- | -- | -- |
| 65.2 | 0.376 | 10.3 | 0.316 | -- | -1.36 | -- | -- | 0.00232 | -- | 78.99 | 774 | -- | -- |
| 38.27 | 0.288 | 10.3 | -- | 0.81 | -0.979 | -- | -- | -0.0332 | 23.3 | 29.68 | 506 | -- | -- |
| 94.36 | 0.454 | 10.2 | 0.668 | -- | -- | -- | -- | 0.211 | -- | -- | -- | -- | -- |
| 52.84 | 0.34 | 10.3 | -- | 0.936 | -- | -- | -- | 0.137 | 22.2 | -- | -- | -- | -- |
| 67.56 | 0.383 | 10.3 | -- | -- | -1.48 | -- | -- | -0.0485 | -- | 93.98 | 783 | -- | -- |
| 106.12 | 0.481 | 10.2 | -- | -- | -- | -- | -- | 0.137 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.83 | temperature | 25 | 720 | < th | dose dependent | sin | 23 | NA |
| 2 | 27.93 | temperature | 25 | 720 | < th | dose dependent | rect. | 7 | 13 |
| 88 | 29.24 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 104 | 29.36 | temperature | 25 | 720 | < th | dose independent | sin | 23 | NA |
| 120 | 29.44 | temperature | 25 | 720 | < th | dose independent | rect. | 7 | 12 |
| 142 | 29.51 | temperature | 25 | 270 | < th | dose independent | sin | 21 | NA |
| 174 | 29.59 | temperature | 25 | 720 | < th | dose independent | rect. | 1 | 18 |
| 212 | 29.66 | temperature | 25 | 720 | < th | dose dependent | rect. | 12 | 1 |
| 217 | 29.67 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 265 | 29.81 | temperature | 30 | 720 | < th | dose dependent | rect. | 11 | 4 |
| 276 | 29.83 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 283 | 29.85 | temperature | 25 | 270 | < th | dose independent | rect. | 5 | 21 |
| 300 | 29.88 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 23 |
| 301 | 29.89 | temperature | 25 | 720 | > th | dose independent | rect. | 23 | 20 |
| 317 | 29.93 | temperature | 25 | 720 | > th | dose independent | sin | 23 | NA |
| 328 | 29.94 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 23 |
| 331 | 29.95 | temperature | 25 | 270 | < th | dose independent | rect. | 8 | 17 |
| 335 | 29.95 | temperature | 10 | 720 | > th | dose dependent | rect. | 2 | 23 |
| 336 | 29.95 | temperature | 10 | 720 | > th | dose dependent | rect. | 9 | 23 |
| 391 | 30.03 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 402 | 30.04 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 404 | 30.05 | temperature | 25 | 720 | < th | dose independent | rect. | 7 | 20 |
| 423 | 30.08 | temperature | 25 | 720 | > th | dose independent | rect. | 7 | 18 |
| 427 | 30.08 | temperature | 10 | 720 | > th | dose dependent | rect. | 18 | 23 |
| 472 | 30.15 | temperature | 15 | 720 | > th | dose dependent | rect. | 20 | 23 |
| 570 | 30.24 | temperature | 10 | 720 | > th | dose dependent | rect. | 9 | 16 |
| 574 | 30.25 | temperature | 25 | 720 | > th | dose independent | rect. | 3 | 17 |
| 598 | 30.27 | temperature | 25 | 720 | > th | dose independent | rect. | 7 | 13 |
| 609 | 30.28 | temperature | 25 | 720 | > th | dose independent | rect. | 8 | 11 |
| 877 | 30.49 | temperature | 15 | 720 | > th | dose dependent | sin | 20 | NA |
| 915 | 30.54 | temperature | 25 | 720 | < th | dose independent | no | NA | NA |
| 932 | 30.55 | temperature | 25 | 720 | > th | dose independent | no | NA | NA |