Os07g0418500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cytochrome P450.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0418500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Cytochrome P450.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 268.66 | 0.77 | 3.37 | -2.14 | 0.276 | 8.62 | -0.668 | -54.8 | 0.317 | 10.5 | 30.3 | 1419 | 8.03 | 0.955 |
| 308.1 | 0.818 | 3.19 | -0.664 | 0.456 | 3.42 | 1.15 | -- | 0.329 | 8.11 | 30.88 | 932 | 8.25 | 0.7 |
| 269.9 | 0.765 | 3.35 | -2.02 | 0.279 | 8.62 | -- | -54.8 | 0.308 | 10.1 | 30.43 | 1452 | 8.07 | 0.952 |
| 273.13 | 0.77 | 3.21 | -0.439 | 0.306 | 3.17 | -- | -- | 0.321 | 8.14 | 30.86 | 1500 | 8.35 | 0.732 |
| 274.6 | 0.772 | 3.36 | -2.01 | -- | 8.55 | -- | -54.3 | 0.308 | -- | 30.4 | 1456 | 8.03 | 0.969 |
| 365.09 | 0.896 | 3.2 | -0.364 | 0.255 | -- | -0.698 | -- | 0.227 | 10.7 | -- | -- | -- | -- |
| 367.1 | 0.897 | 3.21 | -0.393 | 0.26 | -- | -- | -- | 0.224 | 10.4 | -- | -- | -- | -- |
| 274.66 | 0.772 | 3.19 | -0.522 | -- | 2.85 | -- | -- | 0.298 | -- | 30.99 | 1501 | 8.29 | 0.735 |
| 278.63 | 0.777 | 3.18 | -- | 0.24 | 2.99 | -- | -- | 0.372 | 8.03 | 30.8 | 1495 | 8.34 | 0.733 |
| 371.24 | 0.9 | 3.21 | -0.397 | -- | -- | -- | -- | 0.223 | -- | -- | -- | -- | -- |
| 371.16 | 0.901 | 3.2 | -- | 0.263 | -- | -- | -- | 0.268 | 10.5 | -- | -- | -- | -- |
| 281.5 | 0.781 | 3.18 | -- | -- | 2.85 | -- | -- | 0.363 | -- | 30.72 | 1409 | 8.28 | 0.777 |
| 375.4 | 0.904 | 3.2 | -- | -- | -- | -- | -- | 0.267 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 276.44 | temperature | 30 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 29 | 288.89 | temperature | 30 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 57 | 296.66 | wind | 1 | 4320 | < th | dose dependent | rect. | 6 | 2 |
| 58 | 297.95 | temperature | 30 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 60 | 300.48 | temperature | 30 | 4320 | < th | dose independent | rect. | 19 | 14 |
| 61 | 301.24 | temperature | 30 | 4320 | < th | dose independent | rect. | 23 | 10 |
| 62 | 301.26 | temperature | 30 | 4320 | < th | dose independent | rect. | 1 | 8 |
| 63 | 301.37 | wind | 1 | 1440 | < th | dose independent | rect. | 6 | 2 |
| 67 | 301.83 | wind | 1 | 1440 | > th | dose independent | rect. | 6 | 4 |
| 87 | 306.68 | wind | 1 | 1440 | < th | dose dependent | rect. | 6 | 6 |
| 113 | 315.59 | radiation | 1 | 270 | < th | dose independent | rect. | 9 | 3 |
| 114 | 315.59 | radiation | 1 | 270 | < th | dose dependent | rect. | 9 | 3 |
| 126 | 319.70 | radiation | 1 | 720 | < th | dose independent | rect. | 9 | 1 |
| 127 | 319.70 | radiation | 1 | 720 | < th | dose dependent | rect. | 9 | 1 |
| 165 | 324.52 | wind | 1 | 720 | > th | dose independent | rect. | 5 | 14 |
| 210 | 326.05 | wind | 1 | 1440 | < th | dose dependent | rect. | 4 | 8 |
| 244 | 328.36 | radiation | 1 | 720 | > th | dose independent | rect. | 4 | 1 |
| 254 | 328.36 | radiation | 1 | 720 | > th | dose dependent | rect. | 4 | 1 |
| 272 | 328.89 | wind | 1 | 10 | < th | dose independent | rect. | 6 | 2 |
| 324 | 331.09 | radiation | 1 | 270 | < th | dose independent | rect. | 8 | 7 |
| 325 | 331.09 | radiation | 1 | 270 | < th | dose dependent | rect. | 8 | 7 |
| 340 | 331.71 | wind | 1 | 43200 | > th | dose independent | rect. | 5 | 7 |
| 363 | 332.26 | wind | 1 | 43200 | > th | dose independent | rect. | 4 | 9 |
| 364 | 332.41 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 6 |
| 379 | 332.90 | radiation | 1 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 398 | 333.43 | radiation | 40 | 4320 | < th | dose dependent | rect. | 18 | 11 |
| 421 | 334.22 | radiation | 40 | 1440 | < th | dose independent | rect. | 1 | 8 |
| 437 | 334.25 | radiation | 40 | 1440 | < th | dose independent | rect. | 17 | 16 |
| 440 | 334.30 | radiation | 40 | 1440 | < th | dose independent | rect. | 3 | 6 |
| 444 | 334.44 | radiation | 40 | 4320 | < th | dose dependent | rect. | 18 | 2 |
| 471 | 335.03 | wind | 1 | 43200 | > th | dose independent | rect. | 6 | 5 |
| 483 | 335.30 | radiation | 40 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 513 | 335.67 | radiation | 40 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 548 | 336.40 | humidity | 80 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 559 | 336.58 | humidity | 80 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 560 | 336.58 | radiation | 40 | 1440 | < th | dose independent | rect. | 23 | 10 |
| 585 | 336.71 | radiation | 10 | 4320 | < th | dose dependent | rect. | 18 | 6 |
| 595 | 336.83 | humidity | 80 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 625 | 337.41 | radiation | 10 | 4320 | < th | dose dependent | rect. | 18 | 8 |
| 644 | 337.65 | wind | 1 | 43200 | < th | dose dependent | rect. | 4 | 19 |
| 646 | 337.68 | wind | 1 | 43200 | > th | dose independent | rect. | 21 | 16 |
| 652 | 337.75 | wind | 1 | 43200 | > th | dose independent | rect. | 19 | 19 |
| 654 | 337.76 | wind | 1 | 43200 | > th | dose independent | rect. | 23 | 16 |
| 656 | 337.76 | wind | 1 | 43200 | < th | dose dependent | rect. | 4 | 21 |
| 659 | 337.80 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 4 |
| 660 | 337.81 | radiation | 10 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 661 | 337.83 | wind | 1 | 43200 | > th | dose independent | rect. | 21 | 18 |
| 662 | 337.83 | wind | 1 | 43200 | < th | dose dependent | rect. | 7 | 2 |
| 666 | 337.85 | wind | 1 | 43200 | > th | dose independent | sin | 3 | NA |
| 686 | 338.03 | radiation | 1 | 10 | < th | dose independent | rect. | 7 | 5 |
| 688 | 338.03 | radiation | 1 | 10 | < th | dose dependent | rect. | 7 | 5 |
| 743 | 338.62 | wind | 1 | 43200 | < th | dose independent | rect. | 6 | 6 |
| 767 | 338.97 | wind | 1 | 43200 | < th | dose independent | rect. | 5 | 8 |
| 772 | 338.99 | humidity | 90 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 785 | 339.20 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 2 |
| 849 | 339.83 | humidity | 90 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 868 | 340.03 | wind | 9 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 870 | 340.05 | wind | 3 | 43200 | < th | dose dependent | rect. | 20 | 11 |
| 874 | 340.13 | wind | 3 | 43200 | < th | dose dependent | rect. | 4 | 10 |
| 886 | 340.23 | temperature | 30 | 270 | > th | dose dependent | rect. | 8 | 5 |
| 903 | 340.27 | wind | 3 | 43200 | < th | dose dependent | rect. | 21 | 17 |
| 921 | 340.33 | radiation | 10 | 10 | > th | dose independent | rect. | 6 | 1 |
| 948 | 340.33 | radiation | 10 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 974 | 340.34 | wind | 1 | 43200 | > th | dose independent | rect. | 3 | 19 |
| 980 | 340.39 | wind | 7 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 984 | 340.40 | wind | 1 | 43200 | > th | dose independent | rect. | 14 | 22 |
| 986 | 340.41 | wind | 1 | 43200 | < th | dose independent | rect. | 19 | 20 |