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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os07g0415700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.31 (0.0381) R2 : 0.00563
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.129 (0.0803) R2dN8 : 0.00727 R2N8 : 0.00563
σ : 0.718
deviance : 236.61
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
211.24 0.683 3.28 0.143 0.814 0.713 0.401 0.487 0.287 15.3 88.16 162 -- --
211.62 0.678 3.28 0.165 0.799 0.719 0.157 -- 0.292 15.3 88.4 160 -- --
211.56 0.677 3.28 0.165 0.798 0.705 -- 0.218 0.292 15.3 88.33 161 -- --
211.67 0.678 3.28 0.175 0.792 0.712 -- -- 0.292 15.3 88.55 161 -- --
233.69 0.712 3.3 0.194 -- 0.33 -- -0.402 0.192 -- 92.87 155 -- --
223.42 0.701 3.3 0.262 0.442 -- -0.238 -- 0.168 14.4 -- -- -- --
223.63 0.7 3.31 0.256 0.441 -- -- -- 0.166 14.4 -- -- -- --
233.7 0.712 3.3 0.212 -- 0.27 -- -- 0.184 -- 93 154 -- --
212.47 0.679 3.29 -- 0.8 0.733 -- -- 0.276 15.3 88.53 161 -- --
235.12 0.717 3.31 0.237 -- -- -- -- 0.155 -- -- -- -- --
225.35 0.702 3.31 -- 0.437 -- -- -- 0.138 14.4 -- -- -- --
224.87 0.698 3.29 -- -- 0.763 -- -- 0.246 -- 85 1023 -- --
236.61 0.718 3.31 -- -- -- -- -- 0.129 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 206.70 humidity 90 270 < th dose independent rect. 15 19
17 210.08 humidity 60 270 > th dose dependent rect. 18 12
35 210.73 humidity 90 270 > th dose independent rect. 8 21
39 210.78 humidity 90 90 > th dose dependent rect. 19 12
42 210.81 humidity 90 90 > th dose dependent rect. 14 17
46 210.88 humidity 60 90 > th dose dependent sin 10 NA
60 211.06 wind 3 270 < th dose dependent rect. 9 21
70 211.23 humidity 90 270 > th dose dependent rect. 8 21
75 211.25 humidity 90 90 > th dose dependent rect. 8 23
82 211.29 humidity 50 270 > th dose dependent rect. 12 17
99 211.38 wind 1 270 > th dose independent rect. 16 18
102 211.39 humidity 90 90 > th dose dependent sin 10 NA
106 211.41 humidity 90 270 < th dose independent rect. 1 22
113 211.44 humidity 90 90 > th dose dependent rect. 3 22
129 211.51 humidity 90 90 > th dose dependent rect. 1 23
153 211.64 wind 1 270 < th dose independent rect. 9 20
155 211.65 wind 1 270 > th dose independent rect. 13 22
168 211.72 temperature 25 10 < th dose independent rect. 4 2
171 211.73 humidity 90 90 > th dose dependent rect. 19 21
187 211.80 humidity 90 90 > th dose dependent rect. 17 23
207 211.90 humidity 60 270 > th dose dependent sin 12 NA
208 211.90 humidity 90 90 > th dose dependent no NA NA
216 211.92 humidity 60 270 > th dose dependent rect. 14 15
242 212.03 humidity 90 270 > th dose independent rect. 19 10
246 212.04 humidity 90 270 < th dose independent rect. 16 12
258 212.09 humidity 90 270 > th dose dependent sin 14 NA
286 212.21 humidity 90 270 > th dose independent rect. 12 17
302 212.26 humidity 90 270 < th dose independent sin 12 NA
318 212.34 humidity 90 270 > th dose independent rect. 19 22
326 212.39 atmosphere 1000 270 > th dose independent rect. 10 6
342 212.44 humidity 90 90 < th dose dependent rect. 19 15
343 212.47 humidity 90 270 < th dose independent rect. 1 9
345 212.48 wind 5 4320 < th dose independent rect. 12 3
365 212.56 wind 1 270 > th dose independent rect. 15 11
385 212.61 wind 9 270 < th dose dependent rect. 10 20
394 212.64 wind 5 4320 > th dose independent rect. 12 3
399 212.65 humidity 90 10 > th dose dependent rect. 4 22
408 212.69 wind 1 270 < th dose independent rect. 13 16
409 212.69 humidity 90 270 < th dose independent rect. 6 22
419 212.71 humidity 90 90 > th dose dependent rect. 3 4
425 212.73 humidity 90 10 > th dose dependent rect. 4 20
426 212.74 humidity 90 270 > th dose independent sin 12 NA
439 212.77 humidity 90 270 > th dose independent rect. 19 16
464 212.83 atmosphere 995 270 > th dose dependent rect. 10 6
467 212.85 humidity 90 270 > th dose independent rect. 12 22
481 212.89 humidity 90 270 < th dose independent no NA NA
512 212.95 humidity 90 270 < th dose independent rect. 3 23
529 213.00 humidity 90 270 > th dose independent no NA NA
536 213.02 humidity 90 10 < th dose independent rect. 18 17
555 213.07 wind 1 30 > th dose independent rect. 16 22
559 213.08 wind 1 270 > th dose independent sin 16 NA
568 213.09 humidity 90 270 > th dose independent rect. 24 23
594 213.14 humidity 90 90 > th dose independent sin 9 NA
687 213.28 humidity 90 90 > th dose independent rect. 3 4
702 213.30 humidity 90 270 < th dose dependent rect. 16 18
722 213.35 wind 1 270 < th dose independent sin 16 NA
748 213.37 atmosphere 995 270 > th dose independent rect. 10 20
772 213.40 atmosphere 1000 270 > th dose independent rect. 11 4
793 213.42 humidity 90 270 < th dose independent rect. 5 18
807 213.44 humidity 90 270 < th dose independent rect. 16 7
824 213.47 humidity 90 90 > th dose dependent rect. 3 7
889 213.58 temperature 25 10 > th dose independent rect. 19 17
914 213.60 wind 1 30 > th dose independent rect. 6 23
966 213.66 temperature 25 270 > th dose independent rect. 16 19
983 213.68 humidity 90 10 > th dose independent rect. 4 2
989 213.68 temperature 30 270 < th dose independent rect. 10 20