Os07g0415500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0415500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein kinase-like domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 108.61 | 0.49 | 7.29 | 1.93 | 0.528 | -2.13 | 0.454 | 2.33 | 0.466 | 20.6 | 20.74 | 255 | -- | -- |
| 111.32 | 0.495 | 7.32 | 1.48 | 0.113 | -2.13 | 0.339 | -- | 0.363 | 18 | 19.18 | 218 | -- | -- |
| 109.21 | 0.487 | 7.29 | 1.95 | 0.543 | -2.16 | -- | 2.49 | 0.479 | 20.4 | 20.8 | 258 | -- | -- |
| 111.24 | 0.494 | 7.32 | 1.48 | 0.143 | -2.15 | -- | -- | 0.369 | 16.5 | 19.78 | 259 | -- | -- |
| 111.9 | 0.495 | 7.31 | 1.54 | -- | -2.07 | -- | 0.54 | 0.371 | -- | 20.05 | 77 | -- | -- |
| 179.78 | 0.629 | 7.4 | 1.04 | 0.675 | -- | 0.523 | -- | 0.00358 | 1.9 | -- | -- | -- | -- |
| 180.83 | 0.63 | 7.41 | 1.02 | 0.676 | -- | -- | -- | 0.00044 | 1.94 | -- | -- | -- | -- |
| 111.73 | 0.492 | 7.32 | 1.46 | -- | -2.07 | -- | -- | 0.355 | -- | 19.67 | 18 | -- | -- |
| 164.14 | 0.6 | 7.38 | -- | 0.11 | -1.67 | -- | -- | 0.128 | 23.7 | 20.29 | 9 | -- | -- |
| 208.41 | 0.675 | 7.4 | 1.05 | -- | -- | -- | -- | 0.0161 | -- | -- | -- | -- | -- |
| 208.48 | 0.675 | 7.43 | -- | 0.695 | -- | -- | -- | -0.114 | 1.98 | -- | -- | -- | -- |
| 164.72 | 0.6 | 7.37 | -- | -- | -1.75 | -- | -- | 0.139 | -- | 20.4 | 9 | -- | -- |
| 237.61 | 0.719 | 7.43 | -- | -- | -- | -- | -- | -0.101 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 107.00 | temperature | 20 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 2 | 107.02 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 19 |
| 3 | 107.14 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 10 | 107.80 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 14 | 107.99 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 38 | 108.94 | temperature | 20 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 39 | 108.96 | temperature | 20 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 42 | 109.04 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 56 | 109.36 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 65 | 109.63 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 80 | 109.85 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 90 | 110.06 | temperature | 20 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 92 | 110.17 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 20 |
| 100 | 110.25 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 126 | 110.65 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 127 | 110.71 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 14 |
| 152 | 110.97 | temperature | 20 | 1440 | > th | dose dependent | sin | 14 | NA |
| 175 | 111.13 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 179 | 111.16 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 187 | 111.22 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 197 | 111.31 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 5 |
| 223 | 111.54 | temperature | 20 | 720 | > th | dose dependent | sin | 6 | NA |
| 242 | 111.68 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 243 | 111.68 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 258 | 111.81 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 5 |
| 305 | 112.16 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 315 | 112.22 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 325 | 112.29 | temperature | 15 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 376 | 112.61 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 379 | 112.62 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 404 | 112.76 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 467 | 113.13 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 470 | 113.14 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 510 | 113.36 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 23 |
| 519 | 113.38 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 22 |
| 532 | 113.40 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 533 | 113.40 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 543 | 113.45 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 544 | 113.46 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 640 | 113.89 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 691 | 114.10 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 729 | 114.29 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 11 |
| 786 | 114.53 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 7 |
| 834 | 114.77 | temperature | 30 | 1440 | < th | dose dependent | sin | 16 | NA |
| 839 | 114.80 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 865 | 114.91 | temperature | 25 | 1440 | > th | dose independent | rect. | 15 | 7 |
| 927 | 115.13 | temperature | 25 | 1440 | < th | dose independent | sin | 18 | NA |