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Os07g0414700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF707 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.09 (0.0352) R2 : 0.665
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.18 (0.0959) R2dC : 0.425 R2C : 0.501
β3 : 2.22 (0.281) R2dE : 0.0516 R2E : 0.123
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.742 (0.0744) R2dN8 : 0.0961 R2N8 : 0.0953
σ : 0.658
deviance : 199.53
__
_____
C
peak time of C : 19.2
E
wheather : humidity
threshold : 49.24
memory length : 323
response mode : < th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
192.23 0.651 7.13 -0.175 2.14 3.53 0.698 -6.51 -0.738 19.2 50 344 -- --
200.7 0.66 7.09 -0.0407 2.13 2.41 0.197 -- -0.724 19.1 50 404 -- --
193.44 0.648 7.13 -0.199 2.13 3.62 -- -6.41 -0.733 19.2 49.87 353 -- --
199.61 0.658 7.09 -0.023 2.15 2.35 -- -- -0.73 19.2 49.04 325 -- --
403.67 0.936 7.07 -0.463 -- 4.13 -- -6.35 -0.702 -- 51 453 -- --
221.04 0.697 7.11 0.167 2.42 -- 1.35 -- -0.808 19.1 -- -- -- --
225.82 0.704 7.11 0.141 2.43 -- -- -- -0.805 19.1 -- -- -- --
306.59 0.816 7.08 -0.0183 -- 2.28 -- -- -0.946 -- 75 593 -- --
199.53 0.658 7.09 -- 2.18 2.22 -- -- -0.742 19.2 49.24 323 -- --
536.38 1.08 7.06 0.0929 -- -- -- -- -0.849 -- -- -- -- --
226.34 0.704 7.12 -- 2.43 -- -- -- -0.82 19.1 -- -- -- --
306.63 0.816 7.08 -- -- 2.26 -- -- -0.94 -- 74.88 593 -- --
536.61 1.08 7.06 -- -- -- -- -- -0.859 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 178.83 temperature 10.0 90 > th dose dependent rect. 21 18
2 180.00 temperature 10.0 10 > th dose dependent rect. 21 19
8 181.95 temperature 10.0 90 > th dose dependent rect. 15 6
9 182.04 humidity 50.0 270 > th dose independent rect. 10 14
12 182.53 radiation 10.0 14400 < th dose dependent rect. 22 3
13 182.57 temperature 15.0 10 > th dose dependent rect. 16 5
18 183.19 temperature 25.0 10 > th dose dependent rect. 16 9
25 183.48 temperature 25.0 10 > th dose dependent rect. 16 14
26 183.52 humidity 90.0 90 < th dose independent rect. 15 6
28 183.56 atmosphere 1000.0 90 > th dose independent rect. 15 6
30 183.72 temperature 15.0 90 > th dose dependent rect. 5 10
31 183.75 temperature 25.0 10 > th dose dependent rect. 16 5
32 183.76 temperature 25.0 90 > th dose dependent rect. 16 5
35 183.83 temperature 25.0 10 > th dose dependent rect. 16 7
37 183.85 temperature 20.0 270 > th dose independent rect. 4 10
38 183.97 temperature 25.0 90 > th dose dependent rect. 16 9
39 184.01 temperature 30.0 270 < th dose dependent rect. 24 9
40 184.02 temperature 15.0 10 > th dose dependent rect. 6 10
54 184.45 humidity 90.0 10 < th dose dependent rect. 16 14
61 184.73 precipitation 0.1 90 < th dose independent rect. 15 6
62 184.73 precipitation 0.1 90 < th dose dependent rect. 15 6
66 184.86 humidity 90.0 10 < th dose dependent rect. 16 5
68 184.91 wind 7.0 90 < th dose independent rect. 15 6
81 185.41 temperature 15.0 90 > th dose independent rect. 21 18
82 185.46 humidity 90.0 270 < th dose dependent rect. 16 1
85 185.48 humidity 90.0 10 < th dose dependent rect. 16 12
86 185.49 radiation 20.0 30 < th dose independent rect. 14 7
89 185.55 humidity 90.0 10 < th dose independent rect. 16 5
91 185.59 radiation 1.0 270 > th dose independent rect. 15 3
101 185.79 humidity 90.0 10 < th dose dependent rect. 16 10
102 185.80 radiation 1.0 270 > th dose independent rect. 15 14
105 185.86 temperature 25.0 30 > th dose independent rect. 16 5
124 186.09 wind 1.0 90 > th dose independent rect. 15 6
125 186.12 radiation 10.0 14400 < th dose dependent rect. 22 5
134 186.37 wind 9.0 90 < th dose independent rect. 21 18
142 186.56 temperature 10.0 90 > th dose independent rect. 15 6
144 186.56 atmosphere 1010.0 90 < th dose independent rect. 15 6
154 186.78 humidity 70.0 270 < th dose independent rect. 15 2
160 186.88 humidity 90.0 270 < th dose dependent rect. 15 3
163 186.98 temperature 15.0 270 > th dose dependent rect. 16 1
164 186.99 temperature 25.0 270 > th dose dependent rect. 16 1
186 187.39 atmosphere 995.0 90 > th dose independent rect. 21 18
189 187.43 humidity 50.0 270 > th dose independent rect. 16 23
196 187.52 wind 1.0 270 > th dose independent rect. 13 6
199 187.54 radiation 1.0 270 < th dose dependent rect. 16 8
218 187.73 atmosphere 995.0 270 > th dose independent rect. 15 2
221 187.80 radiation 1.0 270 < th dose independent rect. 16 8
224 187.86 precipitation 0.1 90 < th dose independent rect. 21 18
225 187.86 precipitation 0.1 90 < th dose dependent rect. 21 18
236 187.96 atmosphere 995.0 270 > th dose independent rect. 13 6
238 188.01 temperature 10.0 1440 > th dose independent rect. 16 6
241 188.01 temperature 10.0 1440 > th dose independent rect. 22 18
250 188.16 humidity 90.0 270 < th dose independent rect. 15 3
255 188.18 atmosphere 995.0 90 > th dose dependent rect. 15 6
263 188.29 radiation 1.0 270 > th dose independent rect. 16 1
264 188.33 wind 7.0 270 < th dose independent rect. 15 2
283 188.52 radiation 20.0 30 < th dose independent rect. 12 9
287 188.57 atmosphere 995.0 30 > th dose independent rect. 24 21
297 188.64 radiation 1.0 270 > th dose independent sin 15 NA
326 188.85 humidity 90.0 270 < th dose independent rect. 16 1
342 188.95 wind 7.0 270 < th dose independent rect. 13 6
349 188.98 atmosphere 995.0 270 > th dose independent rect. 24 19
358 189.04 precipitation 0.1 30 < th dose independent rect. 24 21
360 189.04 precipitation 0.1 30 < th dose dependent rect. 24 21
362 189.05 temperature 25.0 90 > th dose independent rect. 1 14
386 189.16 radiation 1.0 270 > th dose dependent rect. 16 14
393 189.19 radiation 1.0 270 < th dose independent sin 15 NA
396 189.19 radiation 1.0 270 > th dose dependent rect. 16 2
428 189.36 radiation 1.0 270 < th dose dependent sin 16 NA
443 189.44 temperature 20.0 270 > th dose independent rect. 19 18
453 189.50 precipitation 0.1 270 < th dose independent rect. 15 2
454 189.50 precipitation 0.1 270 < th dose dependent rect. 15 2
483 189.64 humidity 50.0 720 < th dose independent rect. 15 3
512 189.74 precipitation 0.1 270 < th dose independent rect. 22 23
515 189.74 precipitation 0.1 270 < th dose dependent rect. 22 23
534 189.86 radiation 40.0 10 < th dose dependent rect. 15 6
535 189.87 wind 1.0 270 > th dose independent rect. 24 19
552 189.96 wind 7.0 270 < th dose independent rect. 14 15
563 190.03 humidity 50.0 270 > th dose independent rect. 4 23
568 190.08 radiation 40.0 270 < th dose independent rect. 15 2
570 190.11 humidity 50.0 30 > th dose dependent rect. 21 3
582 190.19 temperature 30.0 270 < th dose independent rect. 18 6
586 190.20 precipitation 0.1 270 < th dose independent rect. 13 6
588 190.20 precipitation 0.1 270 < th dose dependent rect. 13 6
599 190.25 humidity 70.0 270 > th dose independent rect. 18 6
605 190.27 temperature 15.0 270 > th dose independent rect. 17 22
611 190.29 temperature 20.0 270 > th dose independent rect. 15 2
614 190.31 temperature 10.0 270 > th dose independent rect. 15 2
616 190.31 atmosphere 1010.0 270 < th dose independent rect. 15 2
625 190.37 wind 9.0 30 < th dose dependent rect. 15 6
634 190.41 humidity 50.0 720 < th dose independent sin 11 NA
641 190.45 precipitation 0.1 270 < th dose independent rect. 24 19
643 190.45 precipitation 0.1 270 < th dose dependent rect. 24 19
644 190.46 humidity 50.0 270 > th dose dependent rect. 17 7
652 190.49 temperature 10.0 1440 > th dose independent rect. 22 3
655 190.49 temperature 30.0 1440 < th dose independent rect. 22 3
659 190.49 humidity 50.0 1440 > th dose independent rect. 22 3
667 190.49 atmosphere 995.0 1440 > th dose independent rect. 22 3
668 190.49 radiation 1.0 1440 < th dose independent rect. 22 3
688 190.49 temperature 10.0 1440 > th dose independent rect. 1 21
710 190.54 atmosphere 995.0 30 > th dose independent rect. 3 18
722 190.63 precipitation 0.1 30 < th dose independent rect. 3 18
723 190.63 wind 9.0 30 < th dose independent rect. 24 21
725 190.63 precipitation 0.1 30 < th dose dependent rect. 3 18
748 190.75 wind 1.0 270 > th dose independent rect. 15 2
758 190.78 precipitation 0.1 270 < th dose independent rect. 14 15
759 190.78 atmosphere 1015.0 30 < th dose independent rect. 24 21
761 190.78 precipitation 0.1 270 < th dose dependent rect. 14 15
768 190.81 temperature 10.0 30 > th dose independent rect. 21 3
769 190.81 temperature 30.0 30 < th dose independent rect. 21 3
770 190.81 humidity 50.0 30 > th dose independent rect. 21 3
773 190.81 atmosphere 995.0 30 > th dose independent rect. 21 3
774 190.81 radiation 1.0 30 < th dose independent rect. 21 3
780 190.81 temperature 10.0 30 > th dose independent rect. 24 21
781 190.81 radiation 10.0 30 < th dose dependent rect. 21 3
797 190.86 humidity 50.0 90 > th dose independent rect. 21 18
816 190.87 humidity 50.0 10 > th dose independent rect. 21 18
843 191.02 wind 9.0 30 < th dose independent rect. 21 3
844 191.02 atmosphere 995.0 270 > th dose independent rect. 14 15
851 191.07 precipitation 0.1 270 < th dose independent rect. 23 21
852 191.07 precipitation 0.1 270 < th dose dependent rect. 23 21
854 191.09 wind 9.0 270 < th dose independent rect. 19 18
863 191.13 temperature 10.0 270 > th dose independent rect. 13 6
865 191.13 atmosphere 1010.0 270 < th dose independent rect. 13 6
868 191.13 atmosphere 995.0 270 > th dose independent rect. 19 18
873 191.15 humidity 50.0 270 < th dose dependent rect. 15 2
878 191.18 humidity 50.0 270 > th dose dependent rect. 10 14
905 191.25 wind 9.0 270 < th dose independent rect. 17 22
921 191.30 precipitation 0.1 30 < th dose independent rect. 21 3
924 191.30 precipitation 0.1 30 < th dose dependent rect. 21 3
931 191.33 wind 9.0 270 < th dose independent rect. 24 19
947 191.39 humidity 80.0 10 < th dose independent rect. 16 14
989 191.48 radiation 30.0 43200 < th dose independent rect. 17 5
991 191.48 humidity 80.0 30 < th dose dependent sin 12 NA