Os07g0414000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transferase family protein.
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Os07g0414000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 322.11 | 0.843 | 12.6 | -1.02 | 4.06 | -2.91 | 3.89 | -1.07 | -0.569 | 8.44 | 80.98 | 914 | 16.4 | -- |
| 323.48 | 0.838 | 12.6 | -1.12 | 4.05 | -2.93 | 4.02 | -- | -0.567 | 8.44 | 80.68 | 910 | 16.6 | -- |
| 368.43 | 0.894 | 12.6 | -0.88 | 3.98 | -2.9 | -- | -2.35 | -0.503 | 8.46 | 79.29 | 889 | 16.5 | -- |
| 375.21 | 0.902 | 12.6 | -1.05 | 4.04 | -2.82 | -- | -- | -0.55 | 8.47 | 80 | 910 | 16.6 | -- |
| 471.44 | 1.01 | 12.7 | -0.86 | -- | -4.18 | -- | -3.98 | -0.355 | -- | 39 | 2588 | 19 | -- |
| 471.98 | 1.02 | 12.5 | -0.951 | 4.21 | -- | 3.82 | -- | -0.285 | 8.39 | -- | -- | -- | -- |
| 517.89 | 1.07 | 12.5 | -0.834 | 4.2 | -- | -- | -- | -0.286 | 8.4 | -- | -- | -- | -- |
| 516.64 | 1.06 | 12.6 | -0.845 | -- | -4.18 | -- | -- | -0.281 | -- | 39 | 2361 | 17.3 | -- |
| 396.73 | 0.928 | 12.6 | -- | 4.09 | -2.95 | -- | -- | -0.606 | 8.47 | 83 | 902 | 16.4 | -- |
| 1499.45 | 1.81 | 12.6 | -0.811 | -- | -- | -- | -- | -0.243 | -- | -- | -- | -- | -- |
| 536.21 | 1.08 | 12.5 | -- | 4.19 | -- | -- | -- | -0.193 | 8.42 | -- | -- | -- | -- |
| 535.75 | 1.08 | 12.6 | -- | -- | -4.18 | -- | -- | -0.192 | -- | 39 | 2384 | 17.4 | -- |
| 1516.79 | 1.82 | 12.6 | -- | -- | -- | -- | -- | -0.153 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 333.74 | humidity | 80 | 720 | < th | dose independent | rect. | 11 | 10 |
| 2 | 334.40 | humidity | 80 | 720 | > th | dose independent | rect. | 11 | 9 |
| 10 | 338.40 | humidity | 70 | 720 | > th | dose dependent | rect. | 11 | 10 |
| 11 | 338.56 | humidity | 60 | 720 | > th | dose dependent | rect. | 11 | 15 |
| 13 | 338.76 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 17 | 339.33 | humidity | 70 | 720 | > th | dose dependent | sin | 19 | NA |
| 24 | 340.16 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 30 | 340.55 | humidity | 60 | 720 | > th | dose dependent | rect. | 14 | 6 |
| 40 | 341.65 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 9 |
| 52 | 342.21 | humidity | 80 | 720 | > th | dose independent | sin | 21 | NA |
| 66 | 342.96 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 9 |
| 93 | 344.38 | humidity | 80 | 720 | < th | dose independent | sin | 21 | NA |
| 217 | 348.83 | humidity | 80 | 1440 | < th | dose independent | sin | 1 | NA |
| 251 | 349.88 | humidity | 80 | 1440 | > th | dose independent | sin | 1 | NA |
| 261 | 350.09 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 310 | 351.50 | radiation | 1 | 720 | < th | dose dependent | rect. | 13 | 4 |
| 315 | 351.59 | humidity | 90 | 720 | < th | dose dependent | rect. | 12 | 12 |
| 320 | 351.66 | humidity | 80 | 720 | > th | dose independent | rect. | 10 | 16 |
| 366 | 352.92 | radiation | 1 | 720 | < th | dose dependent | rect. | 9 | 8 |
| 526 | 356.37 | humidity | 90 | 720 | < th | dose dependent | sin | 18 | NA |
| 558 | 357.21 | humidity | 70 | 720 | > th | dose independent | rect. | 14 | 14 |
| 872 | 363.15 | radiation | 1 | 270 | < th | dose dependent | rect. | 5 | 14 |
| 958 | 364.46 | radiation | 1 | 720 | < th | dose dependent | rect. | 9 | 18 |
| 959 | 364.49 | radiation | 1 | 720 | < th | dose dependent | rect. | 7 | 20 |