Os07g0407700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os07g0407700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 90.14 | 0.446 | 8.58 | -2.44 | 1.38 | -0.0994 | -0.301 | -2.4 | 0.0504 | 20.9 | 63.06 | 4914 | -- | -- |
| 93.93 | 0.451 | 8.54 | -2.81 | 1.32 | -0.54 | -0.534 | -- | -0.00584 | 20.8 | 52.02 | 24227 | -- | -- |
| 90.43 | 0.443 | 8.58 | -2.43 | 1.38 | -0.106 | -- | -2.42 | 0.0508 | 20.9 | 63.28 | 4930 | -- | -- |
| 90.69 | 0.444 | 8.55 | -2.71 | 1.39 | -0.724 | -- | -- | 0.0253 | 20.8 | 51.01 | 15592 | -- | -- |
| 194.95 | 0.65 | 8.54 | -2.76 | -- | 0.542 | -- | -3.12 | -0.0204 | -- | 81 | 5108 | -- | -- |
| 102.85 | 0.475 | 8.56 | -2.58 | 1.36 | -- | -0.49 | -- | 0.0439 | 20.9 | -- | -- | -- | -- |
| 103.64 | 0.477 | 8.56 | -2.57 | 1.36 | -- | -- | -- | 0.0435 | 20.9 | -- | -- | -- | -- |
| 168.77 | 0.605 | 8.54 | -2.74 | -- | 1.16 | -- | -- | -0.102 | -- | 93.64 | 708 | -- | -- |
| 221.13 | 0.693 | 8.47 | -- | 1.38 | -1.29 | -- | -- | 0.348 | 20.2 | 35.25 | 5598 | -- | -- |
| 209.65 | 0.677 | 8.53 | -2.57 | -- | -- | -- | -- | 0.0342 | -- | -- | -- | -- | -- |
| 277.21 | 0.779 | 8.5 | -- | 1.37 | -- | -- | -- | 0.329 | 20.8 | -- | -- | -- | -- |
| 322.49 | 0.836 | 8.46 | -- | -- | -1.57 | -- | -- | 0.267 | -- | 40.04 | 9972 | -- | -- |
| 383.32 | 0.914 | 8.46 | -- | -- | -- | -- | -- | 0.319 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 87.87 | wind | 1.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 2 | 87.89 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 4 | 88.00 | wind | 1.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 7 | 88.41 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 8 | 88.57 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 11 | 88.65 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 3 | 5 |
| 17 | 88.73 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 3 | 5 |
| 19 | 88.75 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 4 | 3 |
| 27 | 88.85 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 18 | 2 |
| 30 | 88.86 | wind | 9.0 | 14400 | < th | dose independent | rect. | 19 | 18 |
| 34 | 88.90 | wind | 1.0 | 14400 | > th | dose independent | rect. | 8 | 5 |
| 40 | 88.97 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 20 | 12 |
| 42 | 88.99 | wind | 7.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 43 | 88.99 | wind | 1.0 | 14400 | > th | dose independent | rect. | 6 | 7 |
| 51 | 89.03 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 21 | 11 |
| 63 | 89.11 | wind | 9.0 | 14400 | > th | dose independent | rect. | 20 | 17 |
| 79 | 89.17 | wind | 5.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 91 | 89.24 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 5 |
| 96 | 89.26 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 11 | 2 |
| 100 | 89.28 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 5 |
| 101 | 89.28 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 104 | 89.30 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 5 |
| 105 | 89.30 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 5 |
| 126 | 89.36 | wind | 9.0 | 14400 | < th | dose independent | rect. | 16 | 21 |
| 152 | 89.45 | wind | 1.0 | 14400 | < th | dose independent | rect. | 8 | 5 |
| 159 | 89.46 | wind | 9.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 165 | 89.47 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 16 | 21 |
| 169 | 89.48 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 174 | 89.48 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 16 | 21 |
| 175 | 89.49 | wind | 1.0 | 14400 | > th | dose dependent | sin | 8 | NA |
| 212 | 89.59 | wind | 5.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 213 | 89.59 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 8 |
| 216 | 89.59 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 8 |
| 223 | 89.61 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 233 | 89.63 | wind | 7.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 235 | 89.63 | wind | 3.0 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 257 | 89.66 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 19 | 18 |
| 259 | 89.67 | wind | 9.0 | 14400 | > th | dose independent | rect. | 16 | 21 |
| 270 | 89.70 | wind | 3.0 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 282 | 89.72 | wind | 1.0 | 14400 | < th | dose independent | rect. | 6 | 7 |
| 324 | 89.80 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 359 | 89.87 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 3 |
| 363 | 89.87 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 3 |
| 365 | 89.88 | humidity | 90.0 | 270 | < th | dose independent | rect. | 8 | 5 |
| 367 | 89.88 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 11 | 6 |
| 400 | 89.91 | wind | 9.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 412 | 89.93 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 414 | 89.93 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 497 | 90.02 | wind | 9.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 528 | 90.06 | wind | 3.0 | 14400 | > th | dose independent | rect. | 20 | 12 |
| 548 | 90.08 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 8 | 5 |
| 632 | 90.17 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 633 | 90.17 | wind | 3.0 | 14400 | < th | dose independent | rect. | 20 | 12 |
| 711 | 90.26 | humidity | 50.0 | 14400 | < th | dose dependent | sin | 22 | NA |
| 768 | 90.31 | humidity | 50.0 | 14400 | < th | dose dependent | no | NA | NA |
| 939 | 90.38 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 8 | 5 |
| 976 | 90.41 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 978 | 90.41 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 12 | 12 |
| 987 | 90.42 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 13 | 10 |
| 996 | 90.43 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 7 |