Os07g0298700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Prefoldin domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0298700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Prefoldin domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 214.78 | 0.689 | 3.83 | -2.25 | 0.228 | 1.72 | 0.256 | -4.32 | 0.617 | 21 | 26.35 | 241 | -- | -- |
| 218.51 | 0.688 | 3.78 | -1.81 | 0.195 | 1.35 | 0.275 | -- | 0.69 | 21.7 | 25.71 | 247 | -- | -- |
| 214.91 | 0.683 | 3.83 | -2.27 | 0.248 | 1.74 | -- | -4.63 | 0.629 | 20.4 | 26.6 | 233 | -- | -- |
| 218.49 | 0.688 | 3.78 | -1.84 | 0.191 | 1.31 | -- | -- | 0.688 | 20.1 | 25.9 | 281 | -- | -- |
| 217.28 | 0.687 | 3.83 | -2.28 | -- | 1.78 | -- | -4.39 | 0.617 | -- | 26.35 | 281 | -- | -- |
| 245.6 | 0.735 | 3.78 | -1.63 | 0.709 | -- | 0.0932 | -- | 0.744 | 17.8 | -- | -- | -- | -- |
| 245.62 | 0.734 | 3.78 | -1.63 | 0.71 | -- | -- | -- | 0.744 | 17.8 | -- | -- | -- | -- |
| 220.14 | 0.691 | 3.78 | -1.85 | -- | 1.37 | -- | -- | 0.676 | -- | 25.73 | 317 | -- | -- |
| 302.46 | 0.81 | 3.73 | -- | 0.428 | 0.887 | -- | -- | 0.934 | 18.2 | 27.08 | 251 | -- | -- |
| 271.76 | 0.77 | 3.77 | -1.65 | -- | -- | -- | -- | 0.728 | -- | -- | -- | -- | -- |
| 315.68 | 0.831 | 3.74 | -- | 0.736 | -- | -- | -- | 0.926 | 17.6 | -- | -- | -- | -- |
| 308.5 | 0.818 | 3.73 | -- | -- | 1.14 | -- | -- | 0.9 | -- | 26.1 | 302 | -- | -- |
| 343.8 | 0.865 | 3.73 | -- | -- | -- | -- | -- | 0.911 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 212.86 | temperature | 20 | 270 | > th | dose dependent | sin | 22 | NA |
| 4 | 213.10 | temperature | 20 | 30 | > th | dose dependent | rect. | 12 | 23 |
| 14 | 214.37 | temperature | 25 | 270 | > th | dose dependent | rect. | 8 | 10 |
| 23 | 214.85 | temperature | 25 | 270 | > th | dose dependent | rect. | 2 | 16 |
| 43 | 215.31 | temperature | 25 | 270 | > th | dose dependent | rect. | 21 | 21 |
| 54 | 215.60 | temperature | 25 | 270 | > th | dose dependent | rect. | 8 | 14 |
| 65 | 215.66 | temperature | 20 | 30 | > th | dose dependent | rect. | 12 | 12 |
| 72 | 215.76 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 13 |
| 141 | 216.37 | temperature | 20 | 30 | > th | dose dependent | rect. | 12 | 8 |
| 142 | 216.37 | temperature | 25 | 270 | > th | dose dependent | rect. | 8 | 20 |
| 183 | 216.69 | temperature | 30 | 270 | < th | dose dependent | sin | 21 | NA |
| 200 | 216.87 | temperature | 20 | 30 | > th | dose dependent | rect. | 12 | 14 |
| 214 | 216.96 | temperature | 25 | 270 | > th | dose dependent | no | NA | NA |
| 228 | 217.17 | temperature | 30 | 90 | < th | dose dependent | sin | 19 | NA |
| 252 | 217.62 | temperature | 30 | 10 | < th | dose dependent | sin | 18 | NA |
| 296 | 218.09 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 9 |
| 399 | 219.05 | temperature | 30 | 270 | < th | dose independent | rect. | 13 | 23 |
| 401 | 219.05 | temperature | 25 | 270 | > th | dose dependent | rect. | 14 | 23 |
| 411 | 219.12 | temperature | 30 | 270 | < th | dose independent | rect. | 7 | 14 |
| 425 | 219.23 | temperature | 10 | 270 | > th | dose dependent | rect. | 9 | 23 |
| 451 | 219.44 | temperature | 20 | 30 | > th | dose dependent | rect. | 12 | 18 |
| 465 | 219.52 | temperature | 20 | 30 | > th | dose dependent | rect. | 12 | 16 |
| 510 | 219.76 | temperature | 30 | 270 | < th | dose independent | rect. | 15 | 23 |
| 534 | 219.89 | temperature | 15 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 553 | 219.99 | temperature | 30 | 720 | < th | dose independent | rect. | 2 | 10 |
| 636 | 220.38 | temperature | 30 | 270 | < th | dose independent | rect. | 6 | 23 |
| 711 | 220.69 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 19 |
| 723 | 220.76 | temperature | 30 | 720 | < th | dose independent | rect. | 24 | 13 |
| 789 | 220.97 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 18 |
| 803 | 221.02 | temperature | 30 | 270 | > th | dose independent | rect. | 8 | 10 |
| 830 | 221.08 | temperature | 30 | 720 | < th | dose independent | rect. | 9 | 3 |
| 833 | 221.09 | temperature | 30 | 270 | < th | dose independent | sin | 21 | NA |
| 848 | 221.14 | temperature | 30 | 270 | > th | dose independent | rect. | 11 | 7 |
| 872 | 221.21 | temperature | 30 | 720 | > th | dose independent | rect. | 17 | 21 |
| 877 | 221.24 | temperature | 30 | 270 | > th | dose independent | sin | 22 | NA |
| 880 | 221.26 | temperature | 30 | 270 | > th | dose independent | rect. | 11 | 23 |
| 890 | 221.28 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 920 | 221.38 | temperature | 30 | 720 | < th | dose independent | rect. | 20 | 16 |
| 923 | 221.39 | temperature | 30 | 270 | < th | dose independent | no | NA | NA |
| 979 | 221.62 | temperature | 30 | 10 | < th | dose independent | rect. | 11 | 14 |
| 998 | 221.69 | temperature | 30 | 90 | < th | dose dependent | rect. | 10 | 17 |