Os07g0298400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0298400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 157.52 | 0.59 | 3.06 | -0.16 | 0.819 | 0.735 | -1.43 | -1.35 | -0.0563 | 14 | 7.486 | 249 | -- | -- |
| 159.48 | 0.588 | 3.02 | -0.104 | 1.22 | 0.996 | -0.18 | -- | -0.0222 | 13.8 | 2.046 | 255 | -- | -- |
| 158.19 | 0.586 | 3.06 | -0.164 | 0.926 | 0.805 | -- | -0.0831 | -0.0668 | 14 | 2.454 | 250 | -- | -- |
| 158.23 | 0.586 | 3.06 | -0.175 | 0.927 | 0.803 | -- | -- | -0.0563 | 14 | 3.944 | 241 | -- | -- |
| 162.32 | 0.597 | 3.07 | -0.22 | -- | 0.0148 | -- | -0.211 | -0.0875 | -- | 3.868 | 723 | -- | -- |
| 162.48 | 0.598 | 3.07 | -0.224 | 0.028 | -- | -0.195 | -- | -0.0878 | 18.9 | -- | -- | -- | -- |
| 162.57 | 0.597 | 3.07 | -0.221 | 0.0287 | -- | -- | -- | -0.0884 | 20.3 | -- | -- | -- | -- |
| 162.51 | 0.594 | 3.07 | -0.224 | -- | -0.0667 | -- | -- | -0.0934 | -- | 10 | 991 | -- | -- |
| 158.87 | 0.587 | 3.05 | -- | 1.08 | 0.925 | -- | -- | -0.0359 | 14 | 2.077 | 250 | -- | -- |
| 162.62 | 0.596 | 3.07 | -0.221 | -- | -- | -- | -- | -0.0888 | -- | -- | -- | -- | -- |
| 163.85 | 0.599 | 3.07 | -- | 0.0301 | -- | -- | -- | -0.0639 | 19.7 | -- | -- | -- | -- |
| 163.71 | 0.598 | 3.06 | -- | -- | 0.0415 | -- | -- | -0.0636 | -- | 0.2724 | 1612 | -- | -- |
| 163.9 | 0.598 | 3.06 | -- | -- | -- | -- | -- | -0.0642 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 145.87 | radiation | 1 | 270 | < th | dose independent | rect. | 14 | 1 |
| 2 | 145.87 | radiation | 1 | 270 | < th | dose dependent | rect. | 14 | 1 |
| 13 | 149.97 | radiation | 1 | 270 | < th | dose dependent | rect. | 9 | 7 |
| 31 | 151.62 | temperature | 25 | 30 | > th | dose dependent | rect. | 5 | 1 |
| 59 | 153.60 | temperature | 25 | 30 | > th | dose independent | rect. | 5 | 1 |
| 60 | 153.73 | humidity | 80 | 90 | < th | dose dependent | rect. | 20 | 2 |
| 67 | 153.88 | wind | 5 | 30 | > th | dose independent | rect. | 20 | 2 |
| 77 | 154.19 | humidity | 80 | 270 | > th | dose dependent | rect. | 14 | 2 |
| 80 | 154.39 | wind | 9 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 93 | 154.51 | humidity | 80 | 270 | > th | dose independent | rect. | 14 | 1 |
| 98 | 154.61 | humidity | 80 | 270 | > th | dose dependent | rect. | 12 | 4 |
| 103 | 154.78 | humidity | 80 | 90 | < th | dose independent | rect. | 21 | 1 |
| 104 | 154.78 | radiation | 1 | 720 | < th | dose independent | rect. | 9 | 3 |
| 105 | 154.78 | radiation | 1 | 720 | < th | dose dependent | rect. | 9 | 3 |
| 122 | 155.11 | wind | 3 | 30 | > th | dose dependent | rect. | 20 | 2 |
| 130 | 155.25 | radiation | 10 | 270 | < th | dose dependent | rect. | 11 | 19 |
| 138 | 155.34 | humidity | 80 | 10 | < th | dose dependent | rect. | 22 | 1 |
| 157 | 155.52 | humidity | 50 | 10 | > th | dose independent | rect. | 22 | 22 |
| 158 | 155.53 | radiation | 1 | 90 | > th | dose dependent | rect. | 5 | 1 |
| 159 | 155.54 | radiation | 1 | 720 | < th | dose independent | rect. | 11 | 1 |
| 160 | 155.54 | radiation | 1 | 720 | < th | dose dependent | rect. | 11 | 1 |
| 214 | 155.96 | radiation | 10 | 90 | < th | dose independent | rect. | 14 | 18 |
| 240 | 156.11 | wind | 7 | 270 | > th | dose dependent | rect. | 14 | 1 |
| 254 | 156.16 | radiation | 1 | 270 | < th | dose independent | rect. | 11 | 18 |
| 257 | 156.17 | atmosphere | 1005 | 270 | > th | dose dependent | rect. | 18 | 1 |
| 259 | 156.17 | atmosphere | 1005 | 90 | > th | dose dependent | rect. | 19 | 3 |
| 274 | 156.25 | radiation | 1 | 720 | > th | dose independent | rect. | 9 | 6 |
| 280 | 156.26 | atmosphere | 1005 | 90 | > th | dose dependent | rect. | 20 | 1 |
| 285 | 156.30 | atmosphere | 1000 | 10 | > th | dose dependent | rect. | 20 | 2 |
| 298 | 156.35 | radiation | 1 | 270 | > th | dose independent | rect. | 6 | 12 |
| 312 | 156.45 | radiation | 1 | 270 | > th | dose independent | rect. | 6 | 23 |
| 333 | 156.53 | humidity | 80 | 10 | < th | dose independent | rect. | 21 | 1 |
| 355 | 156.60 | temperature | 25 | 90 | < th | dose dependent | rect. | 19 | 3 |
| 368 | 156.64 | temperature | 25 | 270 | < th | dose independent | rect. | 14 | 2 |
| 382 | 156.71 | humidity | 50 | 10 | < th | dose independent | rect. | 11 | 1 |
| 476 | 156.71 | humidity | 50 | 10 | < th | dose dependent | rect. | 11 | 1 |
| 570 | 156.74 | humidity | 80 | 10 | > th | dose independent | rect. | 15 | 4 |
| 574 | 156.75 | radiation | 1 | 270 | < th | dose dependent | sin | 0 | NA |
| 577 | 156.76 | wind | 7 | 270 | > th | dose independent | rect. | 14 | 1 |
| 588 | 156.81 | atmosphere | 1005 | 720 | > th | dose independent | rect. | 10 | 1 |
| 611 | 156.90 | temperature | 20 | 270 | < th | dose independent | rect. | 11 | 8 |
| 612 | 156.90 | humidity | 50 | 10 | > th | dose independent | rect. | 23 | 19 |
| 620 | 156.93 | temperature | 20 | 270 | < th | dose independent | rect. | 18 | 1 |
| 621 | 156.93 | temperature | 20 | 270 | < th | dose dependent | rect. | 18 | 1 |
| 623 | 156.93 | temperature | 20 | 270 | < th | dose dependent | rect. | 12 | 7 |
| 627 | 156.94 | temperature | 20 | 270 | < th | dose independent | rect. | 9 | 10 |
| 633 | 156.96 | temperature | 20 | 270 | < th | dose independent | rect. | 15 | 4 |
| 638 | 156.97 | temperature | 25 | 10 | < th | dose dependent | rect. | 19 | 4 |
| 643 | 156.98 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 7 |
| 656 | 157.02 | humidity | 50 | 10 | > th | dose independent | rect. | 7 | 11 |
| 681 | 157.05 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 21 | 1 |
| 729 | 157.20 | atmosphere | 995 | 10 | > th | dose dependent | rect. | 10 | 13 |
| 741 | 157.24 | radiation | 1 | 720 | > th | dose independent | rect. | 7 | 9 |
| 772 | 157.30 | radiation | 10 | 270 | < th | dose dependent | rect. | 20 | 23 |
| 773 | 157.31 | radiation | 10 | 90 | < th | dose independent | rect. | 14 | 21 |
| 780 | 157.34 | atmosphere | 1000 | 10 | > th | dose independent | rect. | 10 | 13 |
| 789 | 157.36 | radiation | 1 | 90 | > th | dose independent | rect. | 5 | 1 |
| 795 | 157.37 | radiation | 10 | 1440 | < th | dose dependent | rect. | 24 | 5 |
| 804 | 157.39 | humidity | 70 | 10 | > th | dose dependent | rect. | 15 | 4 |
| 812 | 157.41 | radiation | 1 | 10 | < th | dose dependent | rect. | 7 | 12 |
| 824 | 157.42 | temperature | 25 | 10 | < th | dose dependent | rect. | 22 | 1 |
| 827 | 157.42 | radiation | 1 | 10 | < th | dose dependent | rect. | 11 | 8 |
| 845 | 157.46 | wind | 1 | 720 | > th | dose independent | rect. | 10 | 3 |
| 877 | 157.51 | temperature | 25 | 90 | < th | dose dependent | rect. | 20 | 1 |
| 884 | 157.53 | radiation | 1 | 720 | < th | dose independent | rect. | 22 | 8 |
| 893 | 157.55 | radiation | 1 | 270 | < th | dose independent | sin | 23 | NA |
| 910 | 157.59 | radiation | 1 | 270 | > th | dose independent | sin | 23 | NA |
| 912 | 157.59 | temperature | 25 | 90 | < th | dose independent | rect. | 20 | 1 |
| 915 | 157.59 | radiation | 30 | 720 | < th | dose independent | rect. | 22 | 11 |
| 929 | 157.62 | radiation | 40 | 90 | < th | dose independent | rect. | 23 | 12 |
| 965 | 157.68 | wind | 9 | 30 | > th | dose independent | rect. | 17 | 1 |
| 975 | 157.69 | humidity | 50 | 10 | > th | dose independent | rect. | 7 | 13 |
| 989 | 157.71 | atmosphere | 1005 | 90 | > th | dose independent | rect. | 5 | 1 |
| 992 | 157.71 | radiation | 20 | 90 | < th | dose dependent | rect. | 14 | 22 |