Os07g0295200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF167 family protein.
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Os07g0295200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF167 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8.43 | 0.136 | 10.7 | -0.0738 | 0.249 | -0.594 | -0.00919 | -0.163 | -0.0369 | 23.4 | 10.14 | 78 | -- | -- |
| 8.45 | 0.135 | 10.7 | -0.0509 | 0.251 | -0.596 | 0.0205 | -- | -0.0306 | 23.4 | 10.36 | 82 | -- | -- |
| 8.43 | 0.135 | 10.7 | -0.0723 | 0.249 | -0.594 | -- | -0.154 | -0.0365 | 23.4 | 10.13 | 78 | -- | -- |
| 8.45 | 0.135 | 10.7 | -0.0507 | 0.247 | -0.596 | -- | -- | -0.0306 | 23.5 | 10.14 | 74 | -- | -- |
| 11.1 | 0.156 | 10.7 | -0.0296 | -- | -0.702 | -- | -0.0675 | -0.00272 | -- | 17.56 | 41 | -- | -- |
| 11.93 | 0.162 | 10.7 | -0.17 | 0.376 | -- | 0.072 | -- | -0.114 | 0.867 | -- | -- | -- | -- |
| 11.95 | 0.162 | 10.7 | -0.173 | 0.375 | -- | -- | -- | -0.115 | 0.866 | -- | -- | -- | -- |
| 11.1 | 0.156 | 10.7 | -0.0186 | -- | -0.707 | -- | -- | 0.00037 | -- | 17.5 | 12 | -- | -- |
| 8.51 | 0.136 | 10.7 | -- | 0.245 | -0.622 | -- | -- | -0.0221 | 23.3 | 10.57 | 81 | -- | -- |
| 20.74 | 0.213 | 10.7 | -0.159 | -- | -- | -- | -- | -0.108 | -- | -- | -- | -- | -- |
| 12.74 | 0.167 | 10.7 | -- | 0.373 | -- | -- | -- | -0.0955 | 0.846 | -- | -- | -- | -- |
| 11.09 | 0.156 | 10.7 | -- | -- | -0.723 | -- | -- | 0.00294 | -- | 17.42 | 9 | -- | -- |
| 21.41 | 0.216 | 10.7 | -- | -- | -- | -- | -- | -0.0901 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 7.73 | temperature | 15 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 2 | 7.75 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 22 |
| 9 | 8.05 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 20 |
| 10 | 8.05 | temperature | 20 | 30 | > th | dose dependent | rect. | 9 | 21 |
| 25 | 8.20 | temperature | 10 | 1440 | > th | dose dependent | rect. | 9 | 1 |
| 30 | 8.20 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 3 |
| 71 | 8.29 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 22 |
| 109 | 8.38 | temperature | 30 | 10 | < th | dose dependent | rect. | 6 | 20 |
| 130 | 8.42 | temperature | 30 | 10 | < th | dose dependent | rect. | 6 | 18 |
| 141 | 8.44 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 167 | 8.47 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 185 | 8.49 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 195 | 8.51 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 251 | 8.56 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 252 | 8.56 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 273 | 8.58 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 23 |
| 274 | 8.58 | temperature | 20 | 90 | > th | dose dependent | rect. | 20 | 23 |
| 275 | 8.58 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 301 | 8.60 | temperature | 20 | 90 | > th | dose dependent | rect. | 2 | 23 |
| 360 | 8.65 | temperature | 10 | 1440 | > th | dose dependent | sin | 4 | NA |
| 433 | 8.67 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 436 | 8.68 | temperature | 25 | 1440 | > th | dose dependent | sin | 6 | NA |
| 451 | 8.68 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 525 | 8.71 | temperature | 30 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 570 | 8.73 | temperature | 20 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 571 | 8.73 | temperature | 20 | 90 | > th | dose dependent | rect. | 22 | 23 |
| 759 | 8.80 | temperature | 30 | 1440 | < th | dose dependent | sin | 5 | NA |
| 781 | 8.80 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 18 |
| 976 | 8.84 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |