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Os07g0295000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Mitochondrial substrate carrier family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.44 (0.0294) R2 : 0.596
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.98 (0.0771) R2dC : 0.585 R2C : 0.573
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.28 (0.062) R2dN8 : 0.0234 R2N8 : 0.0107
σ : 0.555
deviance : 140.94
__
_____
C
peak time of C : 17.7
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
115.96 0.506 6.5 0.0801 1.78 0.913 0.999 -4.88 0.19 18 25.58 89 -- --
122.56 0.52 6.43 0.608 1.84 0.575 0.518 -- 0.323 18 25.58 89 -- --
117.65 0.509 6.48 0.199 1.83 0.948 -- -4.23 0.235 18 26.05 76 -- --
123.21 0.52 6.43 0.601 1.83 0.592 -- -- 0.324 18 25.58 89 -- --
214.36 0.682 6.53 -0.485 -- 2.39 -- -5.72 -0.0798 -- 24.5 298 -- --
127.48 0.529 6.43 0.69 1.99 -- 0.65 -- 0.354 17.7 -- -- -- --
128.51 0.531 6.42 0.687 1.99 -- -- -- 0.356 17.7 -- -- -- --
227.43 0.702 6.44 0.311 -- 1.93 -- -- 0.131 -- 24.4 294 -- --
132.39 0.539 6.45 -- 1.79 0.739 -- -- 0.251 18.1 25.58 89 -- --
334.03 0.854 6.39 0.623 -- -- -- -- 0.309 -- -- -- -- --
140.94 0.555 6.44 -- 1.98 -- -- -- 0.28 17.7 -- -- -- --
229.95 0.706 6.44 -- -- 1.97 -- -- 0.091 -- 24.36 294 -- --
344.28 0.866 6.41 -- -- -- -- -- 0.24 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 107.12 wind 7.0 270 < th dose independent rect. 5 22
2 107.18 wind 7.0 30 < th dose independent rect. 8 20
5 108.38 wind 7.0 270 < th dose independent rect. 6 20
9 108.96 wind 5.0 270 < th dose independent rect. 3 2
12 109.29 temperature 10.0 10 > th dose dependent rect. 8 20
14 109.54 temperature 10.0 90 > th dose dependent rect. 8 19
18 109.66 wind 5.0 30 < th dose independent rect. 4 4
19 109.69 wind 7.0 10 < th dose dependent rect. 4 4
29 110.07 wind 7.0 270 < th dose dependent rect. 4 1
31 110.11 precipitation 0.1 270 < th dose independent rect. 3 2
32 110.11 precipitation 0.1 270 < th dose dependent rect. 3 2
54 110.83 precipitation 0.1 10 < th dose independent rect. 4 4
55 110.83 precipitation 0.1 10 < th dose dependent rect. 4 4
59 110.89 temperature 10.0 270 > th dose independent rect. 3 2
61 110.89 temperature 30.0 270 < th dose independent rect. 3 2
62 110.89 humidity 50.0 270 > th dose independent rect. 3 2
65 110.89 atmosphere 995.0 270 > th dose independent rect. 3 2
66 110.89 atmosphere 1010.0 270 < th dose independent rect. 3 2
68 110.89 radiation 20.0 270 < th dose independent rect. 3 2
71 110.89 temperature 10.0 270 > th dose independent rect. 5 22
72 110.89 radiation 1.0 270 < th dose dependent rect. 3 2
74 110.90 wind 7.0 270 < th dose independent rect. 6 9
77 110.93 temperature 10.0 30 > th dose independent rect. 4 4
79 110.93 temperature 30.0 30 < th dose independent rect. 4 4
80 110.93 humidity 50.0 30 > th dose independent rect. 4 4
82 110.93 atmosphere 995.0 30 > th dose independent rect. 4 4
83 110.93 atmosphere 1015.0 30 < th dose independent rect. 4 4
84 110.93 temperature 10.0 30 > th dose independent rect. 8 20
85 110.93 radiation 40.0 270 < th dose dependent rect. 3 2
89 110.95 precipitation 0.1 30 < th dose independent rect. 8 20
91 110.95 precipitation 0.1 30 < th dose dependent rect. 8 20
104 111.05 radiation 1.0 270 < th dose independent rect. 3 2
115 111.27 temperature 10.0 270 > th dose dependent rect. 6 7
122 111.39 radiation 40.0 30 < th dose independent rect. 4 4
129 111.51 humidity 50.0 270 > th dose dependent rect. 3 2
147 111.65 wind 9.0 90 < th dose dependent rect. 8 19
174 111.82 wind 9.0 270 < th dose dependent rect. 6 20
175 111.83 wind 7.0 90 < th dose independent rect. 8 7
177 111.87 atmosphere 995.0 30 > th dose independent rect. 8 20
178 111.89 wind 1.0 270 > th dose independent rect. 3 1
179 111.89 precipitation 0.1 270 < th dose independent rect. 5 22
182 111.89 precipitation 0.1 270 < th dose dependent rect. 5 22
186 111.94 atmosphere 1015.0 30 < th dose dependent rect. 4 4
189 111.98 temperature 10.0 10 > th dose dependent rect. 8 7
192 112.02 temperature 10.0 90 > th dose dependent rect. 8 7
194 112.05 temperature 25.0 270 > th dose independent rect. 7 6
195 112.05 temperature 10.0 30 > th dose dependent rect. 4 4
204 112.14 humidity 50.0 30 > th dose independent rect. 8 20
206 112.15 temperature 30.0 10 < th dose dependent rect. 4 19
233 112.23 radiation 20.0 270 < th dose independent rect. 2 4
236 112.23 temperature 10.0 270 > th dose independent rect. 6 20
249 112.37 atmosphere 1015.0 270 < th dose dependent rect. 3 2
252 112.38 temperature 10.0 270 > th dose dependent rect. 3 2
253 112.39 temperature 25.0 270 > th dose dependent sin 7 NA
254 112.39 wind 9.0 270 < th dose dependent rect. 6 9
255 112.41 radiation 40.0 270 < th dose dependent rect. 2 4
261 112.43 radiation 1.0 270 < th dose dependent rect. 2 17
263 112.44 temperature 30.0 270 < th dose dependent rect. 3 2
274 112.50 radiation 1.0 270 < th dose dependent rect. 3 7
278 112.53 precipitation 0.1 270 < th dose independent rect. 6 20
280 112.53 precipitation 0.1 270 < th dose dependent rect. 6 20
290 112.58 temperature 30.0 10 < th dose dependent rect. 4 17
331 112.75 atmosphere 1000.0 10 > th dose dependent rect. 4 4
340 112.78 humidity 50.0 30 > th dose dependent rect. 4 4
341 112.78 atmosphere 1000.0 90 > th dose dependent rect. 3 5
343 112.79 atmosphere 1005.0 270 > th dose independent rect. 3 2
384 112.93 temperature 20.0 270 > th dose dependent rect. 7 4
405 113.01 atmosphere 1005.0 90 > th dose independent rect. 3 5
451 113.09 humidity 50.0 270 > th dose dependent rect. 2 4
501 113.31 radiation 1.0 270 < th dose independent rect. 2 17
503 113.32 wind 1.0 270 > th dose independent rect. 2 3
508 113.35 temperature 30.0 270 < th dose independent rect. 15 15
515 113.37 temperature 25.0 270 > th dose dependent rect. 22 15
518 113.38 atmosphere 1000.0 270 > th dose dependent rect. 3 2
570 113.55 temperature 25.0 270 > th dose independent rect. 8 3
579 113.57 temperature 30.0 30 < th dose dependent rect. 4 4
599 113.64 humidity 50.0 270 > th dose independent rect. 15 15
610 113.67 radiation 1.0 270 < th dose independent rect. 2 8
611 113.67 humidity 50.0 270 > th dose independent rect. 6 9
644 113.79 radiation 40.0 270 < th dose dependent rect. 15 15
674 113.89 temperature 25.0 90 > th dose dependent sin 3 NA
689 113.92 temperature 25.0 270 > th dose independent rect. 1 12
690 113.92 temperature 25.0 90 < th dose independent rect. 3 19
703 113.95 radiation 40.0 30 < th dose dependent rect. 4 4
740 114.05 wind 7.0 270 < th dose independent rect. 21 14
743 114.06 atmosphere 1010.0 30 < th dose independent rect. 8 7
778 114.15 temperature 25.0 270 > th dose dependent rect. 17 20
780 114.16 atmosphere 1015.0 30 < th dose independent rect. 8 20
788 114.19 radiation 20.0 270 < th dose dependent rect. 2 7
807 114.24 temperature 15.0 90 > th dose independent rect. 8 7
822 114.28 wind 1.0 14400 < th dose independent rect. 22 4
845 114.33 atmosphere 1015.0 10 < th dose independent rect. 15 17
861 114.34 humidity 60.0 30 > th dose dependent rect. 23 5
924 114.46 humidity 60.0 270 > th dose dependent rect. 23 1
932 114.47 temperature 15.0 270 > th dose independent rect. 6 9
999 114.59 atmosphere 1015.0 270 < th dose independent rect. 11 10