Os07g0293000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os07g0293000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 221.83 | 0.7 | 4.74 | -0.442 | 0.924 | -2.02 | -0.212 | -5.54 | 0.186 | 15.1 | 5.102 | 8433 | -- | -- |
| 245.5 | 0.73 | 4.89 | -0.462 | 0.877 | -1.41 | -0.113 | -- | 0.0373 | 15 | 4.799 | 8521 | -- | -- |
| 221.13 | 0.693 | 4.73 | -0.433 | 0.923 | -2.11 | -- | -5.64 | 0.185 | 15 | 4.972 | 8479 | -- | -- |
| 245.4 | 0.73 | 4.9 | -0.438 | 0.922 | -1.35 | -- | -- | 0.012 | 15.1 | 4.8 | 8512 | -- | -- |
| 265.97 | 0.76 | 4.74 | -0.521 | -- | -2.15 | -- | -5.4 | 0.187 | -- | 4.8 | 8312 | -- | -- |
| 260.31 | 0.756 | 4.91 | 0.0421 | 0.931 | -- | -0.312 | -- | -0.00613 | 15 | -- | -- | -- | -- |
| 260.64 | 0.756 | 4.91 | 0.0354 | 0.93 | -- | -- | -- | -0.00797 | 15.1 | -- | -- | -- | -- |
| 292.85 | 0.797 | 4.91 | -0.551 | -- | -1.44 | -- | -- | -0.00722 | -- | 4.724 | 8365 | -- | -- |
| 248.43 | 0.734 | 4.9 | -- | 0.918 | -1.03 | -- | -- | 0.00232 | 15.3 | 4.743 | 9236 | -- | -- |
| 310.14 | 0.823 | 4.91 | -0.00429 | -- | -- | -- | -- | -0.0322 | -- | -- | -- | -- | -- |
| 260.67 | 0.755 | 4.91 | -- | 0.929 | -- | -- | -- | -0.0119 | 15.1 | -- | -- | -- | -- |
| 296.77 | 0.802 | 4.91 | -- | -- | -1.03 | -- | -- | -0.0238 | -- | 4.75 | 9694 | -- | -- |
| 310.14 | 0.822 | 4.91 | -- | -- | -- | -- | -- | -0.0317 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 211.08 | wind | 5 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 2 | 211.58 | wind | 5 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 5 | 214.95 | wind | 7 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 6 | 216.17 | humidity | 90 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 7 | 216.34 | wind | 5 | 14400 | > th | dose dependent | rect. | 13 | 8 |
| 8 | 216.37 | wind | 7 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 13 | 217.12 | wind | 9 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 22 | 217.75 | wind | 3 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 23 | 217.84 | wind | 5 | 14400 | > th | dose independent | rect. | 12 | 10 |
| 24 | 217.91 | wind | 7 | 14400 | < th | dose independent | rect. | 13 | 6 |
| 28 | 217.99 | wind | 7 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 37 | 218.26 | wind | 5 | 14400 | < th | dose independent | rect. | 11 | 11 |
| 39 | 218.32 | wind | 5 | 14400 | > th | dose independent | rect. | 15 | 6 |
| 44 | 218.44 | wind | 7 | 14400 | > th | dose independent | rect. | 13 | 6 |
| 45 | 218.44 | wind | 5 | 14400 | < th | dose independent | rect. | 5 | 16 |
| 46 | 218.50 | wind | 7 | 14400 | < th | dose independent | rect. | 13 | 8 |
| 58 | 218.65 | wind | 5 | 14400 | > th | dose independent | rect. | 5 | 16 |
| 73 | 218.79 | wind | 5 | 14400 | > th | dose independent | sin | 19 | NA |
| 74 | 218.79 | wind | 5 | 14400 | < th | dose independent | rect. | 9 | 13 |
| 91 | 218.91 | wind | 5 | 14400 | > th | dose dependent | sin | 19 | NA |
| 102 | 219.02 | wind | 5 | 14400 | < th | dose independent | sin | 20 | NA |
| 239 | 220.02 | wind | 5 | 14400 | < th | dose independent | rect. | 11 | 20 |
| 251 | 220.09 | wind | 5 | 14400 | > th | dose independent | rect. | 12 | 19 |
| 266 | 220.15 | wind | 5 | 14400 | > th | dose dependent | rect. | 6 | 15 |
| 288 | 220.27 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 361 | 220.65 | wind | 9 | 14400 | > th | dose independent | rect. | 20 | 2 |
| 403 | 220.86 | wind | 9 | 14400 | > th | dose dependent | sin | 14 | NA |
| 422 | 220.93 | wind | 9 | 14400 | > th | dose dependent | rect. | 20 | 2 |
| 426 | 220.95 | wind | 9 | 14400 | > th | dose independent | rect. | 18 | 3 |
| 491 | 221.21 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 537 | 221.35 | humidity | 90 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 576 | 221.52 | wind | 9 | 14400 | < th | dose independent | rect. | 20 | 2 |
| 607 | 221.61 | radiation | 1 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 648 | 221.74 | wind | 9 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 679 | 221.89 | wind | 3 | 14400 | > th | dose dependent | rect. | 17 | 4 |
| 686 | 221.93 | wind | 5 | 14400 | < th | dose independent | no | NA | NA |
| 759 | 222.17 | wind | 5 | 14400 | > th | dose independent | no | NA | NA |
| 783 | 222.27 | humidity | 80 | 1440 | > th | dose dependent | rect. | 3 | 3 |
| 889 | 222.69 | humidity | 80 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 948 | 222.88 | humidity | 50 | 1440 | > th | dose dependent | rect. | 3 | 3 |
| 950 | 222.90 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 7 | 6 |
| 953 | 222.91 | humidity | 50 | 1440 | > th | dose dependent | rect. | 5 | 1 |