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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os07g0291800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Cytochrome P450.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.34 (0.0492) R2 : 0.796
β1 : 2.54 (0.18) R2dD : 0.0935 R2D : 0.0467
β2 : 4.94 (0.125) R2dC : 0.74 R2C : 0.595
β3 : -2.96 (0.174) R2dE : 0.152 R2E : -0.0426
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.321 (0.108) R2dN8 : 0.00531 R2N8 : -0.0215
σ : 0.905
deviance : 377.95
__
_____
C
peak time of C : 8.38
E
wheather : temperature
threshold : 18
memory length : 141
response mode : > th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 3.63
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
375.61 0.911 6.32 2.75 4.88 -2.91 0.272 1.59 0.366 8.46 18.3 148 3.72 --
378.13 0.906 6.31 2.59 5.02 -2.94 0.178 -- 0.331 8.38 17.94 141 3.5 --
375.83 0.903 6.32 2.76 4.9 -2.93 -- 1.57 0.363 8.43 18.2 147 3.71 --
377.95 0.905 6.34 2.54 4.94 -2.96 -- -- 0.321 8.38 18 141 3.63 --
456.26 0.995 6.55 2.28 -- -5.13 -- -0.184 -0.000672 -- -5.899 5 8.02 --
491.79 1.04 6.48 1.99 4.58 -- 0.67 -- -0.222 9.62 -- -- -- --
493.46 1.04 6.48 2.01 4.58 -- -- -- -0.221 9.61 -- -- -- --
456.33 0.995 6.55 2.3 -- -5.13 -- -- -0.00127 -- -5.652 4 8 --
533.03 1.08 6.44 -- 4.73 -2.08 -- -- -0.102 8.76 18.7 132 3.7 --
1734.03 1.95 6.6 1.98 -- -- -- -- -0.212 -- -- -- -- --
600.17 1.15 6.53 -- 4.58 -- -- -- -0.445 9.58 -- -- -- --
588.07 1.13 6.63 -- -- -4.87 -- -- -0.339 -- -28.74 3 8.2 --
1836.95 2 6.65 -- -- -- -- -- -0.431 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 372.25 temperature 30 270 < th dose dependent rect. 15 15
6 376.59 temperature 30 10 < th dose dependent rect. 14 18
33 383.67 temperature 30 270 < th dose dependent rect. 21 9
37 384.75 temperature 30 90 < th dose dependent rect. 19 13
49 386.67 temperature 20 90 > th dose dependent sin 9 NA
54 388.09 temperature 20 270 < th dose independent rect. 22 9
73 389.55 temperature 30 90 < th dose dependent sin 9 NA
91 391.00 temperature 20 270 > th dose dependent rect. 18 15
120 393.46 radiation 10 4320 > th dose dependent rect. 17 1
137 393.98 temperature 20 270 < th dose independent rect. 14 17
169 395.65 temperature 20 270 > th dose independent rect. 20 14
197 396.66 humidity 60 43200 < th dose dependent rect. 2 6
259 398.54 temperature 20 720 > th dose dependent rect. 15 10
263 398.80 temperature 30 720 < th dose dependent rect. 19 2
315 400.60 temperature 10 720 > th dose dependent rect. 15 10
353 402.01 temperature 20 270 < th dose independent sin 11 NA
355 402.10 temperature 20 270 > th dose dependent rect. 18 9
426 404.14 temperature 20 270 > th dose independent sin 11 NA
429 404.19 temperature 20 10 < th dose independent rect. 24 8
441 404.41 temperature 10 43200 > th dose independent rect. 8 5
446 404.47 wind 5 43200 < th dose dependent rect. 7 3
484 405.33 wind 7 43200 < th dose dependent rect. 8 1
505 405.72 wind 1 43200 > th dose dependent rect. 7 3
543 406.37 radiation 10 4320 > th dose dependent rect. 16 15
551 406.51 wind 3 43200 > th dose independent rect. 7 3
552 406.51 wind 3 43200 < th dose independent rect. 7 3
581 407.13 wind 5 43200 > th dose independent rect. 6 1
587 407.22 humidity 50 43200 < th dose dependent rect. 19 15
626 407.88 temperature 20 90 > th dose independent sin 8 NA
631 407.90 wind 5 43200 < th dose independent rect. 6 1
642 408.03 temperature 15 14400 < th dose independent rect. 6 4
687 408.74 radiation 30 4320 > th dose dependent rect. 15 17
690 408.80 radiation 20 4320 < th dose dependent rect. 17 1
707 408.99 atmosphere 1000 43200 < th dose dependent rect. 11 1
717 409.11 radiation 20 4320 < th dose independent rect. 15 16
730 409.43 temperature 20 720 > th dose dependent rect. 15 4
734 409.49 humidity 50 43200 < th dose independent rect. 5 3
763 409.76 atmosphere 1000 43200 < th dose dependent rect. 9 3
770 409.86 radiation 40 4320 < th dose dependent rect. 17 3
783 410.02 radiation 10 43200 < th dose dependent rect. 19 9
792 410.12 wind 1 43200 < th dose dependent rect. 20 1
809 410.30 wind 9 43200 > th dose dependent rect. 20 11
829 410.55 radiation 20 4320 < th dose dependent rect. 17 7
846 410.69 wind 3 43200 > th dose independent rect. 3 7
849 410.72 radiation 20 4320 < th dose dependent rect. 17 11
850 410.73 radiation 20 4320 < th dose dependent rect. 17 9
879 410.94 wind 3 43200 < th dose independent rect. 3 7
900 411.14 temperature 15 14400 < th dose independent rect. 4 16
909 411.23 temperature 20 270 > th dose independent rect. 17 10
917 411.27 temperature 15 14400 < th dose independent rect. 4 19
920 411.28 temperature 15 14400 < th dose independent rect. 5 6
933 411.33 radiation 10 4320 < th dose independent rect. 16 14
950 411.52 radiation 10 4320 < th dose independent rect. 16 3
962 411.59 temperature 20 720 > th dose dependent sin 15 NA
963 411.60 temperature 15 14400 < th dose independent sin 0 NA
968 411.64 temperature 15 14400 > th dose independent sin 23 NA
981 411.71 radiation 10 4320 < th dose independent rect. 16 11