Os07g0288700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ABC transporter related domain containing protein.
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Os07g0288700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ABC transporter related domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 228.72 | 0.711 | 7.75 | -6.51 | 3.09 | 2.83 | 1.04 | -6.26 | -1.37 | 9.05 | 24.25 | 1297 | -- | -- |
| 236.28 | 0.716 | 7.59 | -5.18 | 3.03 | 2.35 | 1.48 | -- | -1.08 | 8.81 | 22.71 | 5681 | -- | -- |
| 231.97 | 0.709 | 7.76 | -6.52 | 3.13 | 2.82 | -- | -6.4 | -1.41 | 9.07 | 23.83 | 1264 | -- | -- |
| 240.42 | 0.722 | 7.57 | -5.01 | 3 | 2.29 | -- | -- | -1.01 | 8.8 | 23.04 | 5685 | -- | -- |
| 752.34 | 1.28 | 7.81 | -6.14 | -- | 2.45 | -- | -4.46 | -1.36 | -- | 23.21 | 1432 | -- | -- |
| 418.52 | 0.959 | 7.47 | -4.08 | 3 | -- | 1.1 | -- | -0.575 | 8.61 | -- | -- | -- | -- |
| 422.49 | 0.963 | 7.47 | -4.05 | 2.99 | -- | -- | -- | -0.575 | 8.6 | -- | -- | -- | -- |
| 748.89 | 1.27 | 7.64 | -4.97 | -- | 2.24 | -- | -- | -0.954 | -- | 23.53 | 5799 | -- | -- |
| 798.38 | 1.32 | 7.33 | -- | 3.2 | 1.6 | -- | -- | 0.0727 | 8.58 | 28.6 | 2006 | -- | -- |
| 926.91 | 1.42 | 7.55 | -4.04 | -- | -- | -- | -- | -0.548 | -- | -- | -- | -- | -- |
| 854.23 | 1.37 | 7.37 | -- | 2.98 | -- | -- | -- | -0.124 | 8.7 | -- | -- | -- | -- |
| 1289 | 1.67 | 7.41 | -- | -- | 1.14 | -- | -- | 0.0686 | -- | 29.6 | 5810 | -- | -- |
| 1356.96 | 1.72 | 7.45 | -- | -- | -- | -- | -- | -0.1 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 227.26 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 6 |
| 2 | 227.29 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 9 | 228.36 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 2 |
| 25 | 229.83 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 15 |
| 45 | 230.28 | temperature | 25 | 1440 | > th | dose dependent | sin | 21 | NA |
| 70 | 231.52 | temperature | 25 | 1440 | > th | dose dependent | rect. | 24 | 19 |
| 156 | 232.98 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 194 | 233.32 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 218 | 234.10 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 3 |
| 221 | 234.20 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 234 | 234.60 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 23 |
| 235 | 234.62 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 307 | 238.02 | radiation | 1 | 1440 | < th | dose dependent | rect. | 17 | 23 |
| 339 | 239.86 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 340 | 239.87 | radiation | 1 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 343 | 239.90 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 20 |
| 347 | 239.92 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 17 |
| 361 | 240.02 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 23 |
| 362 | 240.03 | radiation | 1 | 1440 | < th | dose dependent | no | NA | NA |
| 368 | 240.05 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 20 |
| 385 | 240.12 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 420 | 240.93 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 478 | 243.27 | radiation | 1 | 1440 | < th | dose dependent | sin | 0 | NA |
| 508 | 243.54 | radiation | 1 | 1440 | < th | dose dependent | sin | 14 | NA |
| 516 | 243.60 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 517 | 243.61 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 537 | 243.80 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 587 | 244.19 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 695 | 244.91 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 708 | 245.08 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 748 | 245.49 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 786 | 246.06 | radiation | 1 | 1440 | < th | dose independent | rect. | 7 | 23 |
| 792 | 246.18 | temperature | 10 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 795 | 246.28 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 5 |
| 811 | 246.54 | radiation | 1 | 1440 | > th | dose independent | rect. | 7 | 23 |
| 829 | 246.74 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 17 |
| 839 | 246.84 | wind | 7 | 43200 | > th | dose independent | rect. | 8 | 13 |
| 842 | 246.87 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 17 |
| 856 | 247.02 | wind | 7 | 43200 | < th | dose independent | rect. | 7 | 15 |
| 857 | 247.02 | wind | 7 | 43200 | > th | dose independent | rect. | 3 | 18 |
| 882 | 247.26 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 5 |
| 916 | 247.60 | wind | 7 | 43200 | > th | dose independent | rect. | 24 | 21 |
| 920 | 247.67 | wind | 7 | 43200 | < th | dose independent | rect. | 10 | 15 |
| 928 | 247.74 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 12 |
| 931 | 247.80 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 17 |
| 942 | 247.88 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 15 |
| 943 | 247.88 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 21 |
| 972 | 248.06 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 21 |
| 980 | 248.12 | wind | 7 | 43200 | < th | dose independent | rect. | 24 | 21 |
| 993 | 248.18 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 15 |
| 997 | 248.20 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 18 |