Os07g0287800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0287800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 52.26 | 0.34 | 2.91 | -0.00781 | 0.0921 | -0.298 | -0.205 | 0.539 | 0.0287 | 4.52 | 38.85 | 241 | -- | -- |
| 52.49 | 0.337 | 2.92 | 0.000251 | 0.0931 | -0.295 | -0.0138 | -- | 0.0308 | 4.5 | 37 | 212 | -- | -- |
| 52.31 | 0.337 | 2.92 | -0.00859 | 0.0873 | -0.289 | -- | 0.409 | 0.0304 | 4.83 | 36.45 | 232 | -- | -- |
| 52.48 | 0.337 | 2.91 | -0.00748 | 0.0872 | -0.305 | -- | -- | 0.0315 | 4.5 | 37 | 202 | -- | -- |
| 52.67 | 0.338 | 2.91 | 0.000448 | -- | -0.229 | -- | 0.449 | 0.0392 | -- | 39.05 | 217 | -- | -- |
| 53.68 | 0.343 | 2.91 | -0.019 | 0.0882 | -- | 0.0857 | -- | 0.05 | 10.1 | -- | -- | -- | -- |
| 53.71 | 0.343 | 2.91 | -0.0157 | 0.0879 | -- | -- | -- | 0.0501 | 10 | -- | -- | -- | -- |
| 52.83 | 0.339 | 2.92 | -0.00244 | -- | -0.261 | -- | -- | 0.0421 | -- | 39.59 | 195 | -- | -- |
| 52.47 | 0.337 | 2.92 | -- | 0.093 | -0.317 | -- | -- | 0.0248 | 4.68 | 36.96 | 201 | -- | -- |
| 54.18 | 0.344 | 2.91 | -0.0168 | -- | -- | -- | -- | 0.05 | -- | -- | -- | -- | -- |
| 53.72 | 0.343 | 2.91 | -- | 0.088 | -- | -- | -- | 0.0519 | 10 | -- | -- | -- | -- |
| 52.83 | 0.339 | 2.91 | -- | -- | -0.257 | -- | -- | 0.0386 | -- | 39.6 | 195 | -- | -- |
| 54.18 | 0.344 | 2.91 | -- | -- | -- | -- | -- | 0.0519 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.47 | wind | 1.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 3 | 49.92 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 1 |
| 4 | 49.92 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 1 |
| 5 | 50.14 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 5 | 1 |
| 7 | 50.41 | wind | 1.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 8 | 50.85 | radiation | 1.0 | 30 | < th | dose independent | rect. | 5 | 1 |
| 11 | 51.06 | wind | 1.0 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 13 | 51.09 | wind | 1.0 | 1440 | < th | dose independent | rect. | 12 | 5 |
| 14 | 51.10 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 12 | 5 |
| 16 | 51.15 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 12 | 2 |
| 17 | 51.15 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 12 | 7 |
| 18 | 51.16 | wind | 1.0 | 1440 | > th | dose independent | rect. | 12 | 2 |
| 19 | 51.16 | wind | 1.0 | 1440 | > th | dose independent | rect. | 12 | 5 |
| 27 | 51.19 | radiation | 40.0 | 720 | < th | dose independent | rect. | 23 | 10 |
| 51 | 51.30 | wind | 1.0 | 1440 | < th | dose independent | rect. | 12 | 12 |
| 69 | 51.35 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 12 | 12 |
| 90 | 51.41 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 95 | 51.42 | wind | 1.0 | 1440 | > th | dose independent | rect. | 12 | 12 |
| 114 | 51.47 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 5 | 9 |
| 118 | 51.48 | wind | 1.0 | 1440 | < th | dose independent | sin | 19 | NA |
| 130 | 51.50 | radiation | 40.0 | 720 | < th | dose independent | rect. | 21 | 14 |
| 144 | 51.52 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 149 | 51.53 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 151 | 51.54 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 158 | 51.54 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 16 | 23 |
| 166 | 51.56 | wind | 5.0 | 30 | > th | dose independent | rect. | 14 | 1 |
| 167 | 51.56 | wind | 1.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 168 | 51.56 | wind | 1.0 | 1440 | < th | dose independent | rect. | 18 | 1 |
| 174 | 51.57 | wind | 1.0 | 1440 | > th | dose independent | sin | 19 | NA |
| 175 | 51.57 | radiation | 30.0 | 30 | > th | dose independent | rect. | 14 | 1 |
| 180 | 51.57 | wind | 3.0 | 30 | > th | dose dependent | rect. | 14 | 1 |
| 182 | 51.58 | humidity | 70.0 | 30 | < th | dose independent | rect. | 14 | 1 |
| 193 | 51.59 | temperature | 25.0 | 30 | > th | dose independent | rect. | 14 | 1 |
| 200 | 51.59 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 14 | 1 |
| 202 | 51.59 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 14 | 1 |
| 206 | 51.60 | wind | 1.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 207 | 51.60 | wind | 1.0 | 1440 | > th | dose independent | rect. | 18 | 1 |
| 208 | 51.60 | humidity | 50.0 | 30 | > th | dose independent | rect. | 14 | 1 |
| 210 | 51.60 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 14 | 1 |
| 212 | 51.60 | wind | 9.0 | 30 | < th | dose independent | rect. | 15 | 23 |
| 213 | 51.60 | wind | 1.0 | 1440 | < th | dose dependent | sin | 20 | NA |
| 215 | 51.60 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 14 | 1 |
| 218 | 51.61 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 14 | 1 |
| 219 | 51.61 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 14 | 1 |
| 223 | 51.62 | wind | 7.0 | 30 | < th | dose independent | rect. | 14 | 1 |
| 225 | 51.62 | temperature | 10.0 | 30 | > th | dose independent | rect. | 14 | 1 |
| 228 | 51.62 | temperature | 30.0 | 30 | < th | dose independent | rect. | 14 | 1 |
| 229 | 51.62 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 14 | 1 |
| 231 | 51.62 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 14 | 1 |
| 234 | 51.62 | radiation | 40.0 | 30 | < th | dose independent | rect. | 14 | 1 |
| 235 | 51.62 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 14 | 1 |
| 237 | 51.62 | temperature | 10.0 | 30 | > th | dose independent | rect. | 15 | 23 |
| 238 | 51.62 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 14 | 1 |
| 245 | 51.64 | radiation | 40.0 | 720 | < th | dose independent | rect. | 15 | 18 |
| 247 | 51.65 | radiation | 30.0 | 270 | > th | dose independent | rect. | 7 | 1 |
| 262 | 51.65 | radiation | 40.0 | 270 | < th | dose independent | rect. | 5 | 12 |
| 271 | 51.66 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 14 | 1 |
| 282 | 51.69 | wind | 9.0 | 30 | < th | dose dependent | rect. | 14 | 1 |
| 289 | 51.70 | radiation | 40.0 | 720 | < th | dose independent | rect. | 5 | 6 |
| 291 | 51.70 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 14 | 1 |
| 330 | 51.76 | radiation | 30.0 | 270 | > th | dose dependent | rect. | 7 | 2 |
| 365 | 51.80 | wind | 1.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 445 | 51.84 | radiation | 40.0 | 720 | < th | dose independent | rect. | 7 | 3 |
| 462 | 51.86 | wind | 1.0 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 465 | 51.87 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 18 | 1 |
| 489 | 51.90 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 500 | 51.91 | radiation | 40.0 | 270 | < th | dose independent | rect. | 21 | 22 |
| 553 | 51.96 | temperature | 10.0 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 575 | 51.98 | radiation | 40.0 | 270 | < th | dose independent | sin | 4 | NA |
| 628 | 52.03 | radiation | 40.0 | 270 | < th | dose independent | sin | 12 | NA |
| 638 | 52.04 | radiation | 40.0 | 270 | < th | dose independent | rect. | 4 | 23 |
| 639 | 52.04 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 686 | 52.06 | radiation | 40.0 | 270 | < th | dose independent | rect. | 12 | 23 |
| 777 | 52.12 | radiation | 30.0 | 270 | > th | dose independent | sin | 9 | NA |
| 783 | 52.13 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 786 | 52.13 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 787 | 52.13 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 797 | 52.15 | radiation | 40.0 | 720 | < th | dose independent | sin | 9 | NA |
| 799 | 52.15 | radiation | 40.0 | 720 | < th | dose independent | rect. | 1 | 9 |
| 804 | 52.16 | radiation | 30.0 | 270 | > th | dose independent | sin | 7 | NA |
| 871 | 52.19 | radiation | 30.0 | 10 | < th | dose independent | rect. | 8 | 12 |
| 878 | 52.20 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 24 | 2 |
| 881 | 52.20 | radiation | 30.0 | 10 | > th | dose independent | rect. | 14 | 22 |
| 883 | 52.20 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 24 | 2 |
| 911 | 52.21 | radiation | 30.0 | 270 | > th | dose dependent | sin | 11 | NA |
| 967 | 52.23 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 993 | 52.24 | radiation | 40.0 | 720 | < th | dose independent | rect. | 18 | 16 |
| 998 | 52.24 | temperature | 10.0 | 43200 | < th | dose dependent | sin | 19 | NA |