Os07g0282300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Aldehyde oxidase 1 homolog (Fragment).
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Os07g0282300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Aldehyde oxidase 1 homolog (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 253.08 | 0.747 | 5.69 | -3.65 | 1.03 | -2.64 | -0.541 | 3.15 | -0.0495 | 21.3 | 24.7 | 1449 | -- | -- |
| 252.22 | 0.74 | 5.59 | -2.96 | 0.932 | -2.44 | -0.613 | -- | -0.0024 | 22.1 | 23.2 | 2097 | -- | -- |
| 254.06 | 0.742 | 5.69 | -3.64 | 1.03 | -2.64 | -- | 3.18 | -0.05 | 21.4 | 24.68 | 1440 | -- | -- |
| 249.22 | 0.735 | 5.59 | -2.73 | 0.815 | -2.24 | -- | -- | 0.131 | 21.8 | 23.2 | 2164 | -- | -- |
| 273.51 | 0.77 | 5.69 | -4.06 | -- | -2.48 | -- | 3.4 | -0.175 | -- | 23.9 | 2216 | -- | -- |
| 450.36 | 0.995 | 5.38 | -1.82 | 1.03 | -- | -0.425 | -- | 1.13 | 22.1 | -- | -- | -- | -- |
| 451.05 | 0.995 | 5.37 | -1.81 | 1.03 | -- | -- | -- | 1.13 | 22.1 | -- | -- | -- | -- |
| 282.25 | 0.782 | 5.57 | -2.83 | -- | -2.4 | -- | -- | 0.0973 | -- | 23.7 | 2230 | -- | -- |
| 422.93 | 0.958 | 5.47 | -- | 0.768 | -1.49 | -- | -- | 0.707 | 21.4 | 23.7 | 939 | -- | -- |
| 515.53 | 1.06 | 5.35 | -1.79 | -- | -- | -- | -- | 1.13 | -- | -- | -- | -- | -- |
| 536.93 | 1.08 | 5.33 | -- | 1.02 | -- | -- | -- | 1.33 | 22 | -- | -- | -- | -- |
| 451.35 | 0.989 | 5.45 | -- | -- | -1.63 | -- | -- | 0.667 | -- | 23.55 | 806 | -- | -- |
| 600.14 | 1.14 | 5.3 | -- | -- | -- | -- | -- | 1.33 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 239.91 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 4 | 242.50 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 15 | 246.61 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 18 |
| 17 | 247.69 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 16 |
| 23 | 248.16 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 7 |
| 29 | 248.61 | wind | 5 | 43200 | > th | dose dependent | rect. | 8 | 9 |
| 34 | 248.74 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 5 |
| 39 | 249.00 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 9 |
| 49 | 249.23 | temperature | 20 | 1440 | > th | dose dependent | sin | 14 | NA |
| 53 | 249.34 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 5 |
| 65 | 249.78 | wind | 5 | 43200 | > th | dose independent | rect. | 8 | 9 |
| 71 | 249.90 | wind | 5 | 43200 | > th | dose dependent | sin | 22 | NA |
| 79 | 250.16 | temperature | 25 | 4320 | < th | dose independent | rect. | 4 | 9 |
| 80 | 250.18 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 7 |
| 92 | 250.54 | wind | 5 | 43200 | > th | dose dependent | rect. | 8 | 13 |
| 95 | 250.63 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 10 |
| 97 | 250.66 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 100 | 250.68 | temperature | 25 | 4320 | > th | dose independent | rect. | 3 | 11 |
| 104 | 250.70 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 107 | 250.73 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 110 | 250.76 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 136 | 251.21 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 14 |
| 161 | 251.47 | wind | 5 | 43200 | < th | dose independent | rect. | 8 | 9 |
| 212 | 252.34 | temperature | 25 | 4320 | < th | dose independent | sin | 4 | NA |
| 248 | 253.02 | temperature | 25 | 4320 | > th | dose independent | sin | 4 | NA |
| 249 | 253.04 | wind | 5 | 43200 | > th | dose independent | sin | 23 | NA |
| 252 | 253.12 | temperature | 25 | 1440 | < th | dose independent | rect. | 4 | 20 |
| 262 | 253.21 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 15 |
| 300 | 253.60 | temperature | 20 | 4320 | > th | dose dependent | rect. | 4 | 1 |
| 309 | 253.68 | wind | 7 | 43200 | < th | dose independent | rect. | 2 | 15 |
| 310 | 253.68 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 20 |
| 363 | 254.18 | wind | 7 | 43200 | < th | dose independent | rect. | 24 | 17 |
| 376 | 254.28 | wind | 7 | 43200 | > th | dose independent | rect. | 2 | 15 |
| 444 | 254.79 | wind | 7 | 43200 | > th | dose independent | rect. | 24 | 17 |
| 502 | 255.21 | wind | 5 | 43200 | < th | dose independent | sin | 23 | NA |
| 518 | 255.31 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 21 |
| 525 | 255.36 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 23 |
| 535 | 255.41 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 556 | 255.54 | temperature | 25 | 4320 | < th | dose independent | rect. | 21 | 21 |
| 626 | 255.89 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 627 | 255.90 | wind | 7 | 43200 | > th | dose independent | sin | 2 | NA |
| 647 | 255.99 | wind | 5 | 43200 | > th | dose dependent | rect. | 14 | 2 |
| 713 | 256.27 | temperature | 25 | 1440 | > th | dose independent | rect. | 4 | 19 |
| 717 | 256.30 | temperature | 25 | 4320 | < th | dose independent | rect. | 23 | 15 |
| 727 | 256.38 | temperature | 25 | 4320 | < th | dose independent | rect. | 22 | 17 |
| 734 | 256.41 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 766 | 256.54 | temperature | 25 | 4320 | > th | dose independent | rect. | 21 | 21 |
| 791 | 256.64 | humidity | 90 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 857 | 256.89 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 9 |
| 883 | 256.99 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 11 |