Os07g0281700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Aldehyde oxidase-2.
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Os07g0281700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Aldehyde oxidase-2.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 64.27 | 0.373 | 2.09 | -1.73 | 0.0669 | 94.3 | 0.476 | 199 | 0.0226 | 11.4 | 15 | 90 | -- | -- |
| 67.34 | 0.385 | 2.91 | -0.0649 | 0.0896 | 0.146 | 0.318 | -- | 0.00791 | 11.2 | 14.5 | 1320 | -- | -- |
| 65.22 | 0.376 | 2.11 | -1.67 | 0.0674 | 94.5 | -- | 199 | 0.0233 | 10.7 | 15.05 | 82 | -- | -- |
| 67.76 | 0.386 | 2.91 | -0.0487 | 0.0895 | 0.0634 | -- | -- | 0.00993 | 11.3 | 15.05 | 82 | -- | -- |
| 65.48 | 0.377 | 2.12 | -1.65 | -- | 94.4 | -- | 199 | 0.0237 | -- | 15.04 | 79 | -- | -- |
| 67.38 | 0.385 | 2.91 | -0.0586 | 0.092 | -- | 0.301 | -- | 0.00942 | 11.2 | -- | -- | -- | -- |
| 67.77 | 0.386 | 2.91 | -0.0463 | 0.0905 | -- | -- | -- | 0.0106 | 11.3 | -- | -- | -- | -- |
| 66.75 | 0.381 | 2.91 | 0.0085 | -- | -0.559 | -- | -- | 0.0253 | -- | 17.1 | 31 | -- | -- |
| 66.33 | 0.381 | 2.91 | -- | 0.0878 | -0.55 | -- | -- | 0.0234 | 11.2 | 15.5 | 218 | -- | -- |
| 68.28 | 0.386 | 2.91 | -0.0486 | -- | -- | -- | -- | 0.00972 | -- | -- | -- | -- | -- |
| 67.83 | 0.385 | 2.91 | -- | 0.091 | -- | -- | -- | 0.0157 | 11.3 | -- | -- | -- | -- |
| 66.73 | 0.38 | 2.91 | -- | -- | -0.56 | -- | -- | 0.0245 | -- | 17.13 | 39 | -- | -- |
| 68.34 | 0.386 | 2.91 | -- | -- | -- | -- | -- | 0.0151 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 60.87 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 3 | 61.08 | humidity | 80.0 | 90 | > th | dose independent | rect. | 10 | 2 |
| 6 | 61.38 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 9 | 1 |
| 8 | 61.38 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 69 | 62.37 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 99 | 62.78 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 6 | 1 |
| 100 | 62.78 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 6 | 1 |
| 149 | 63.18 | radiation | 10.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 156 | 63.21 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 12 | 3 |
| 166 | 63.24 | radiation | 40.0 | 30 | > th | dose dependent | sin | 14 | NA |
| 169 | 63.25 | wind | 3.0 | 270 | < th | dose dependent | rect. | 10 | 2 |
| 213 | 63.54 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 15 | 4 |
| 216 | 63.56 | wind | 1.0 | 270 | < th | dose independent | rect. | 9 | 3 |
| 220 | 63.56 | wind | 9.0 | 270 | > th | dose dependent | rect. | 19 | 15 |
| 225 | 63.59 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 5 | 6 |
| 228 | 63.60 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 239 | 63.65 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 241 | 63.66 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 2 | 1 |
| 244 | 63.66 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 2 | 1 |
| 270 | 63.73 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 10 | 2 |
| 281 | 63.78 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 5 | 6 |
| 301 | 63.82 | wind | 9.0 | 270 | > th | dose independent | rect. | 19 | 15 |
| 321 | 63.86 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 9 | 8 |
| 328 | 63.88 | temperature | 15.0 | 720 | > th | dose independent | rect. | 3 | 9 |
| 351 | 63.93 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 12 | 4 |
| 368 | 63.94 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 6 | 11 |
| 393 | 63.98 | temperature | 20.0 | 90 | < th | dose independent | rect. | 12 | 4 |
| 399 | 63.99 | temperature | 20.0 | 90 | < th | dose independent | rect. | 9 | 7 |
| 412 | 64.01 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 23 | 16 |
| 413 | 64.01 | radiation | 30.0 | 30 | < th | dose dependent | rect. | 12 | 1 |
| 442 | 64.07 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 15 | 2 |
| 453 | 64.08 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 10 | 2 |
| 466 | 64.09 | temperature | 20.0 | 10 | < th | dose independent | rect. | 9 | 8 |
| 467 | 64.09 | wind | 7.0 | 10 | > th | dose independent | rect. | 19 | 18 |
| 468 | 64.09 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 11 | 1 |
| 476 | 64.10 | temperature | 15.0 | 720 | < th | dose independent | rect. | 4 | 1 |
| 482 | 64.10 | atmosphere | 1015.0 | 720 | > th | dose independent | rect. | 23 | 5 |
| 502 | 64.10 | atmosphere | 1015.0 | 720 | > th | dose independent | rect. | 1 | 20 |
| 506 | 64.10 | atmosphere | 1015.0 | 720 | > th | dose dependent | sin | 1 | NA |
| 507 | 64.10 | atmosphere | 1015.0 | 720 | > th | dose dependent | sin | 5 | NA |
| 509 | 64.10 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 4 | 1 |
| 518 | 64.10 | atmosphere | 1015.0 | 720 | > th | dose dependent | rect. | 23 | 3 |
| 523 | 64.10 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 10 | 6 |
| 527 | 64.10 | atmosphere | 1015.0 | 720 | > th | dose dependent | rect. | 1 | 20 |
| 528 | 64.10 | atmosphere | 1015.0 | 720 | > th | dose dependent | rect. | 23 | 22 |
| 529 | 64.11 | atmosphere | 1015.0 | 720 | > th | dose independent | sin | 1 | NA |
| 530 | 64.11 | atmosphere | 1015.0 | 720 | > th | dose independent | sin | 4 | NA |
| 539 | 64.11 | atmosphere | 1015.0 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 579 | 64.12 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 24 | 7 |
| 614 | 64.14 | atmosphere | 1015.0 | 720 | < th | dose independent | sin | 6 | NA |
| 620 | 64.14 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 23 | 9 |
| 626 | 64.14 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 11 | 3 |
| 634 | 64.15 | temperature | 20.0 | 270 | < th | dose independent | rect. | 12 | 1 |
| 641 | 64.15 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 16 | 6 |
| 679 | 64.15 | wind | 7.0 | 10 | > th | dose dependent | rect. | 19 | 18 |
| 721 | 64.17 | atmosphere | 1015.0 | 1440 | > th | dose independent | rect. | 19 | 2 |
| 724 | 64.17 | atmosphere | 1015.0 | 1440 | > th | dose independent | rect. | 17 | 5 |
| 733 | 64.17 | atmosphere | 1015.0 | 1440 | > th | dose independent | rect. | 13 | 9 |
| 738 | 64.17 | temperature | 15.0 | 720 | > th | dose independent | rect. | 1 | 12 |
| 759 | 64.18 | atmosphere | 1015.0 | 720 | > th | dose independent | rect. | 24 | 1 |
| 792 | 64.18 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 6 | 17 |
| 844 | 64.19 | humidity | 80.0 | 90 | > th | dose independent | rect. | 10 | 15 |
| 846 | 64.19 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 7 | 15 |
| 929 | 64.20 | temperature | 20.0 | 10 | < th | dose dependent | sin | 0 | NA |
| 931 | 64.20 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 938 | 64.20 | wind | 7.0 | 270 | > th | dose dependent | rect. | 1 | 7 |
| 943 | 64.21 | atmosphere | 1015.0 | 1440 | < th | dose independent | sin | 20 | NA |
| 945 | 64.21 | atmosphere | 1015.0 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 974 | 64.21 | atmosphere | 1015.0 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 985 | 64.21 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 6 | 6 |
| 997 | 64.22 | atmosphere | 1015.0 | 1440 | > th | dose independent | sin | 20 | NA |