Os07g0281200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0281200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 208.26 | 0.678 | 3.2 | -0.666 | 0.6 | 2.03 | -3.96 | -2.41 | -0.0553 | 1.78 | 20.13 | 13277 | -- | -- |
| 207.87 | 0.672 | 3.3 | -0.531 | 0.597 | 3.06 | -4 | -- | -0.0854 | 1.85 | 19.13 | 13251 | -- | -- |
| 269.22 | 0.764 | 3.2 | -0.526 | 0.597 | 2.21 | -- | -2.04 | -0.037 | 2.02 | 19.74 | 13249 | -- | -- |
| 268.57 | 0.763 | 3.28 | -0.355 | 0.599 | 3.13 | -- | -- | -0.0488 | 1.98 | 19.13 | 13253 | -- | -- |
| 290.63 | 0.794 | 3.24 | -0.491 | -- | 2.55 | -- | -1.15 | -0.0818 | -- | 19.2 | 13252 | -- | -- |
| 320.37 | 0.839 | 3.45 | -2.71 | 0.595 | -- | -4.09 | -- | -0.746 | 1.71 | -- | -- | -- | -- |
| 386.41 | 0.921 | 3.43 | -2.58 | 0.598 | -- | -- | -- | -0.723 | 1.97 | -- | -- | -- | -- |
| 290.17 | 0.793 | 3.28 | -0.328 | -- | 3.13 | -- | -- | -0.0363 | -- | 19.11 | 13254 | -- | -- |
| 269.88 | 0.765 | 3.26 | -- | 0.599 | 3.4 | -- | -- | 0.0409 | 1.94 | 19.43 | 13243 | -- | -- |
| 407.92 | 0.944 | 3.43 | -2.55 | -- | -- | -- | -- | -0.709 | -- | -- | -- | -- | -- |
| 561.57 | 1.11 | 3.37 | -- | 0.55 | -- | -- | -- | -0.436 | 1.85 | -- | -- | -- | -- |
| 291.38 | 0.795 | 3.26 | -- | -- | 3.37 | -- | -- | 0.0472 | -- | 19.38 | 13265 | -- | -- |
| 579.87 | 1.12 | 3.36 | -- | -- | -- | -- | -- | -0.426 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 186.30 | humidity | 50 | 43200 | < th | dose dependent | rect. | 3 | 7 |
| 45 | 197.04 | humidity | 50 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 55 | 199.16 | humidity | 50 | 43200 | > th | dose independent | rect. | 22 | 10 |
| 57 | 199.21 | humidity | 50 | 43200 | > th | dose independent | rect. | 1 | 7 |
| 59 | 199.49 | humidity | 50 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 66 | 200.78 | humidity | 50 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 70 | 201.28 | temperature | 15 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 74 | 201.86 | temperature | 15 | 14400 | < th | dose independent | rect. | 5 | 7 |
| 79 | 202.25 | temperature | 15 | 14400 | > th | dose independent | rect. | 7 | 7 |
| 83 | 202.40 | temperature | 15 | 14400 | < th | dose dependent | rect. | 5 | 5 |
| 105 | 203.20 | temperature | 15 | 14400 | < th | dose dependent | rect. | 4 | 10 |
| 157 | 204.32 | temperature | 15 | 14400 | < th | dose dependent | sin | 1 | NA |
| 161 | 204.39 | temperature | 15 | 14400 | < th | dose dependent | rect. | 9 | 2 |
| 232 | 205.86 | temperature | 15 | 14400 | < th | dose independent | sin | 0 | NA |
| 247 | 206.08 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 16 |
| 249 | 206.11 | temperature | 15 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 251 | 206.14 | wind | 5 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 257 | 206.30 | temperature | 15 | 14400 | < th | dose independent | rect. | 21 | 3 |
| 271 | 206.45 | temperature | 25 | 90 | < th | dose dependent | rect. | 16 | 16 |
| 287 | 206.70 | temperature | 15 | 14400 | < th | dose independent | rect. | 5 | 20 |
| 326 | 207.10 | temperature | 15 | 14400 | > th | dose independent | rect. | 7 | 18 |
| 333 | 207.18 | wind | 3 | 43200 | < th | dose dependent | rect. | 8 | 3 |
| 350 | 207.30 | temperature | 15 | 14400 | < th | dose dependent | rect. | 16 | 22 |
| 356 | 207.32 | temperature | 15 | 14400 | < th | dose dependent | no | NA | NA |
| 360 | 207.34 | temperature | 15 | 14400 | < th | dose dependent | rect. | 13 | 23 |
| 365 | 207.37 | temperature | 20 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 384 | 207.44 | temperature | 15 | 14400 | < th | dose dependent | rect. | 11 | 23 |
| 430 | 207.64 | wind | 3 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 532 | 208.13 | temperature | 15 | 14400 | > th | dose independent | sin | 23 | NA |
| 551 | 208.25 | temperature | 20 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 577 | 208.35 | wind | 3 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 578 | 208.35 | temperature | 15 | 14400 | < th | dose independent | rect. | 21 | 16 |
| 593 | 208.42 | temperature | 15 | 14400 | < th | dose dependent | sin | 17 | NA |
| 610 | 208.51 | temperature | 15 | 14400 | < th | dose dependent | rect. | 17 | 8 |
| 623 | 208.56 | temperature | 15 | 14400 | < th | dose dependent | rect. | 19 | 5 |
| 635 | 208.59 | temperature | 15 | 14400 | < th | dose independent | rect. | 21 | 20 |
| 655 | 208.70 | temperature | 20 | 14400 | < th | dose independent | rect. | 14 | 6 |
| 687 | 208.81 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 707 | 208.90 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 725 | 208.94 | temperature | 15 | 14400 | < th | dose dependent | rect. | 21 | 2 |
| 729 | 208.95 | wind | 3 | 43200 | < th | dose independent | rect. | 8 | 9 |
| 767 | 209.05 | temperature | 15 | 14400 | < th | dose independent | rect. | 24 | 23 |
| 855 | 209.33 | temperature | 20 | 14400 | > th | dose independent | rect. | 14 | 5 |
| 856 | 209.33 | wind | 3 | 43200 | > th | dose independent | rect. | 8 | 9 |
| 862 | 209.35 | temperature | 15 | 14400 | < th | dose independent | no | NA | NA |
| 863 | 209.35 | temperature | 15 | 14400 | < th | dose independent | rect. | 6 | 1 |