Os07g0277600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0277600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 81.26 | 0.424 | 6.95 | -1.5 | 0.701 | -0.569 | -0.0341 | -1.46 | -0.0731 | 17.2 | 22.99 | 1513 | -- | -- |
| 87.53 | 0.436 | 7.03 | -1.94 | 0.656 | -0.672 | -0.142 | -- | -0.236 | 16.4 | 24.4 | 2137 | -- | -- |
| 81.19 | 0.42 | 6.96 | -1.51 | 0.699 | -0.582 | -- | -1.44 | -0.0779 | 17.2 | 22.9 | 1528 | -- | -- |
| 85.93 | 0.432 | 7.01 | -1.93 | 0.681 | -0.562 | -- | -- | -0.14 | 17.3 | 22.6 | 1496 | -- | -- |
| 90.78 | 0.444 | 6.98 | -1.67 | -- | -0.631 | -- | -0.84 | -0.248 | -- | 25.4 | 395 | -- | -- |
| 101.14 | 0.471 | 6.95 | -1.81 | 0.67 | -- | -0.129 | -- | 0.02 | 17.3 | -- | -- | -- | -- |
| 101.18 | 0.471 | 6.95 | -1.81 | 0.67 | -- | -- | -- | 0.0193 | 17.3 | -- | -- | -- | -- |
| 89.79 | 0.441 | 7.03 | -1.99 | -- | -0.764 | -- | -- | -0.286 | -- | 25.63 | 383 | -- | -- |
| 185.16 | 0.637 | 6.92 | -- | 0.687 | -0.197 | -- | -- | 0.168 | 17.6 | 22.4 | 295 | -- | -- |
| 124.6 | 0.522 | 6.95 | -1.83 | -- | -- | -- | -- | 0.00261 | -- | -- | -- | -- | -- |
| 187.57 | 0.641 | 6.91 | -- | 0.701 | -- | -- | -- | 0.221 | 17.2 | -- | -- | -- | -- |
| 194.63 | 0.65 | 6.95 | -- | -- | -0.531 | -- | -- | 0.00902 | -- | 25.7 | 364 | -- | -- |
| 213.28 | 0.682 | 6.9 | -- | -- | -- | -- | -- | 0.206 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 75.89 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 15 |
| 5 | 76.39 | temperature | 15 | 270 | > th | dose dependent | rect. | 6 | 21 |
| 17 | 77.21 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 20 |
| 39 | 78.29 | temperature | 15 | 90 | > th | dose dependent | rect. | 9 | 19 |
| 43 | 78.36 | temperature | 20 | 90 | > th | dose dependent | rect. | 21 | 8 |
| 88 | 79.25 | temperature | 15 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 104 | 79.46 | temperature | 10 | 270 | > th | dose dependent | sin | 11 | NA |
| 124 | 79.71 | temperature | 20 | 90 | > th | dose independent | rect. | 21 | 8 |
| 136 | 79.80 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 138 | 79.80 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 275 | 80.82 | temperature | 30 | 270 | < th | dose dependent | sin | 11 | NA |
| 301 | 81.05 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 341 | 81.29 | temperature | 10 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 358 | 81.39 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 419 | 81.75 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 450 | 81.85 | temperature | 15 | 90 | > th | dose dependent | rect. | 20 | 23 |
| 464 | 81.94 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 2 |
| 471 | 81.96 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 502 | 82.12 | temperature | 15 | 720 | > th | dose dependent | rect. | 13 | 13 |
| 516 | 82.14 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 6 |
| 526 | 82.18 | temperature | 15 | 720 | > th | dose dependent | rect. | 14 | 11 |
| 534 | 82.19 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 609 | 82.41 | temperature | 20 | 720 | > th | dose dependent | rect. | 13 | 19 |
| 629 | 82.44 | temperature | 20 | 720 | > th | dose dependent | sin | 17 | NA |
| 684 | 82.58 | temperature | 20 | 10 | < th | dose independent | rect. | 17 | 14 |
| 736 | 82.66 | temperature | 25 | 1440 | < th | dose independent | rect. | 20 | 1 |
| 737 | 82.66 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 869 | 82.88 | temperature | 20 | 1440 | > th | dose dependent | sin | 11 | NA |
| 907 | 82.95 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 5 |