Os07g0276000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : FBD domain containing protein.
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Os07g0276000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : FBD domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 63.24 | 0.374 | 3.08 | 0.212 | 0.152 | 0.209 | 0.0531 | 0.948 | -0.00872 | 7.65 | 95.01 | 5799 | -- | -- |
| 64.5 | 0.374 | 3.08 | 0.135 | 0.153 | 0.244 | 0.0707 | -- | -0.0319 | 7.83 | 96 | 5595 | -- | -- |
| 63.24 | 0.37 | 3.08 | 0.213 | 0.152 | 0.209 | -- | 0.949 | -0.00878 | 7.62 | 95 | 5799 | -- | -- |
| 64.51 | 0.374 | 3.08 | 0.139 | 0.153 | 0.243 | -- | -- | -0.0329 | 7.78 | 111.9 | 5595 | -- | -- |
| 64.48 | 0.374 | 3.08 | 0.213 | -- | 0.213 | -- | 0.93 | -0.00581 | -- | 95 | 5766 | -- | -- |
| 65.28 | 0.379 | 3.06 | 0.12 | 0.152 | -- | 0.0435 | -- | 0.0206 | 7.49 | -- | -- | -- | -- |
| 65.29 | 0.378 | 3.06 | 0.121 | 0.152 | -- | -- | -- | 0.0205 | 7.45 | -- | -- | -- | -- |
| 65.74 | 0.378 | 3.08 | 0.142 | -- | 0.238 | -- | -- | -0.0299 | -- | 119.7 | 5714 | -- | -- |
| 65.02 | 0.376 | 3.08 | -- | 0.16 | 0.233 | -- | -- | -0.04 | 7.74 | 97 | 5581 | -- | -- |
| 66.53 | 0.381 | 3.07 | 0.124 | -- | -- | -- | -- | 0.0229 | -- | -- | -- | -- | -- |
| 65.68 | 0.379 | 3.07 | -- | 0.154 | -- | -- | -- | 0.00698 | 7.39 | -- | -- | -- | -- |
| 66.27 | 0.379 | 3.08 | -- | -- | 0.217 | -- | -- | -0.0411 | -- | 121.9 | 5703 | -- | -- |
| 66.93 | 0.382 | 3.07 | -- | -- | -- | -- | -- | 0.00921 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 54.06 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 3 | 54.51 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 4 | 54.68 | radiation | 10.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 7 | 56.02 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 9 | 56.80 | wind | 1.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 11 | 57.41 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 14 | 58.20 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 16 | 58.28 | wind | 3.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 20 | 58.58 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 21 | 58.59 | temperature | 25.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 27 | 59.32 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 2 | 5 |
| 33 | 59.61 | humidity | 90.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 36 | 59.66 | wind | 9.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 37 | 59.66 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 41 | 59.66 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 45 | 59.66 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 50 | 59.66 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 51 | 59.66 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 52 | 59.66 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 57 | 59.72 | wind | 5.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 60 | 59.72 | temperature | 10.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 62 | 59.72 | temperature | 30.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 63 | 59.72 | humidity | 50.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 66 | 59.72 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 67 | 59.72 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 69 | 59.72 | radiation | 1.0 | 30 | > th | dose independent | rect. | 6 | 1 |
| 73 | 59.72 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 6 | 1 |
| 74 | 59.72 | temperature | 10.0 | 30 | > th | dose independent | rect. | 7 | 23 |
| 75 | 59.72 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 83 | 60.09 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 7 | 23 |
| 84 | 60.10 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 85 | 60.19 | wind | 9.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 112 | 60.47 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 113 | 60.49 | wind | 9.0 | 30 | < th | dose independent | rect. | 7 | 23 |
| 135 | 61.62 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 146 | 62.38 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 6 |
| 156 | 62.76 | temperature | 25.0 | 720 | > th | dose independent | rect. | 1 | 1 |
| 158 | 62.81 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 163 | 62.89 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 185 | 63.31 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 7 | 8 |
| 186 | 63.34 | humidity | 90.0 | 720 | < th | dose independent | rect. | 1 | 1 |
| 188 | 63.35 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 190 | 63.36 | humidity | 90.0 | 90 | < th | dose independent | rect. | 1 | 6 |
| 191 | 63.39 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 194 | 63.42 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 197 | 63.44 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 198 | 63.44 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 1 | 1 |
| 204 | 63.47 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 7 | 23 |
| 206 | 63.47 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 207 | 63.48 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 213 | 63.48 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 1 | 9 |
| 217 | 63.49 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 2 | 3 |
| 219 | 63.50 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 11 | 5 |
| 220 | 63.50 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 11 | 5 |
| 223 | 63.51 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 225 | 63.51 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 234 | 63.52 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 8 | 2 |
| 267 | 63.53 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 1 | 1 |
| 269 | 63.53 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 4 | 5 |
| 297 | 63.55 | temperature | 25.0 | 720 | > th | dose independent | rect. | 24 | 6 |
| 368 | 63.58 | temperature | 30.0 | 14400 | < th | dose independent | sin | 17 | NA |
| 401 | 63.58 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 3 | 13 |
| 437 | 63.58 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 440 | 63.59 | temperature | 30.0 | 14400 | > th | dose independent | sin | 16 | NA |
| 445 | 63.59 | temperature | 30.0 | 14400 | < th | dose independent | sin | 15 | NA |
| 472 | 63.59 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 8 | 10 |
| 530 | 63.59 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 544 | 63.60 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 14 | 4 |
| 573 | 63.60 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 22 |
| 655 | 63.61 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 14 | 22 |
| 670 | 63.62 | temperature | 30.0 | 14400 | > th | dose independent | no | NA | NA |
| 672 | 63.62 | temperature | 30.0 | 14400 | < th | dose independent | no | NA | NA |
| 674 | 63.62 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 916 | 63.63 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 8 | 10 |
| 936 | 63.64 | humidity | 70.0 | 4320 | > th | dose independent | sin | 1 | NA |
| 937 | 63.64 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 1 | 1 |
| 940 | 63.64 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 14 | 4 |