Os07g0273700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transcriptional factor B3 family protein.
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Os07g0273700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transcriptional factor B3 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 57.34 | 0.356 | 6.91 | 3.99 | 0.206 | -1.1 | -0.322 | -4.08 | 0.771 | 4.17 | 25.21 | 3371 | -- | -- |
| 70.57 | 0.391 | 7.04 | 3.17 | 0.162 | -0.725 | -0.34 | -- | 0.605 | 4.58 | 35.21 | 2698 | -- | -- |
| 57.63 | 0.354 | 6.91 | 3.99 | 0.205 | -1.1 | -- | -4.07 | 0.772 | 4.1 | 25.3 | 3351 | -- | -- |
| 70.9 | 0.392 | 7.04 | 3.17 | 0.151 | -0.738 | -- | -- | 0.603 | 4.27 | 35.5 | 2710 | -- | -- |
| 59.89 | 0.36 | 6.91 | 3.99 | -- | -1.12 | -- | -4.08 | 0.773 | -- | 25.07 | 3387 | -- | -- |
| 81.65 | 0.424 | 7.01 | 3.46 | 0.215 | -- | -0.307 | -- | 0.752 | 3.77 | -- | -- | -- | -- |
| 81.92 | 0.424 | 7.01 | 3.47 | 0.213 | -- | -- | -- | 0.754 | 3.53 | -- | -- | -- | -- |
| 72.08 | 0.395 | 7.04 | 3.16 | -- | -0.773 | -- | -- | 0.599 | -- | 40.85 | 2679 | -- | -- |
| 110.11 | 0.489 | 7.28 | -- | 0.165 | -2.76 | -- | -- | -0.429 | 2.99 | 28.4 | 47520 | -- | -- |
| 84.45 | 0.429 | 7.01 | 3.48 | -- | -- | -- | -- | 0.76 | -- | -- | -- | -- | -- |
| 398.75 | 0.934 | 7.09 | -- | 0.281 | -- | -- | -- | 0.368 | 3.46 | -- | -- | -- | -- |
| 111.54 | 0.492 | 7.28 | -- | -- | -2.75 | -- | -- | -0.437 | -- | 28.21 | 47520 | -- | -- |
| 403.18 | 0.937 | 7.09 | -- | -- | -- | -- | -- | 0.374 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 57.29 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 2 | 57.32 | temperature | 25 | 4320 | < th | dose dependent | rect. | 20 | 3 |
| 5 | 57.45 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 11 | 57.52 | temperature | 25 | 4320 | < th | dose dependent | rect. | 10 | 16 |
| 16 | 57.58 | temperature | 25 | 4320 | < th | dose dependent | rect. | 11 | 14 |
| 24 | 57.61 | temperature | 25 | 4320 | < th | dose dependent | sin | 17 | NA |
| 30 | 57.63 | temperature | 25 | 4320 | < th | dose dependent | rect. | 15 | 10 |
| 112 | 57.90 | temperature | 25 | 4320 | < th | dose dependent | rect. | 15 | 23 |
| 113 | 57.91 | temperature | 25 | 4320 | < th | dose dependent | no | NA | NA |
| 125 | 57.93 | temperature | 25 | 4320 | < th | dose dependent | rect. | 19 | 23 |
| 367 | 58.67 | temperature | 25 | 4320 | < th | dose dependent | sin | 3 | NA |
| 400 | 58.74 | temperature | 10 | 4320 | > th | dose dependent | sin | 13 | NA |
| 799 | 59.34 | temperature | 20 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 807 | 59.35 | temperature | 10 | 1440 | > th | dose dependent | sin | 7 | NA |
| 890 | 59.43 | temperature | 20 | 43200 | < th | dose dependent | rect. | 21 | 11 |
| 901 | 59.44 | temperature | 20 | 43200 | < th | dose dependent | rect. | 3 | 6 |
| 917 | 59.45 | temperature | 20 | 43200 | < th | dose dependent | rect. | 21 | 8 |
| 932 | 59.46 | temperature | 20 | 43200 | < th | dose dependent | sin | 8 | NA |