Os07g0268800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF594 family protein.
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Os07g0268800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF594 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 125.37 | 0.526 | 8.45 | 0.176 | 1.55 | -1.99 | 0.77 | -3.8 | 0.406 | 5.53 | 1.06 | 11510 | -- | -- |
| 150.83 | 0.572 | 8.46 | 0.037 | 1.8 | -1.56 | 1.05 | -- | 0.378 | 5.96 | 2.33 | 12455 | -- | -- |
| 126.78 | 0.524 | 8.45 | 0.189 | 1.55 | -2 | -- | -3.84 | 0.404 | 5.6 | 1.056 | 11497 | -- | -- |
| 145.38 | 0.562 | 8.46 | -0.465 | 1.88 | -1.57 | -- | -- | 0.425 | 5.8 | 2.068 | 12399 | -- | -- |
| 251.99 | 0.739 | 8.45 | 0.34 | -- | -2.12 | -- | -4.3 | 0.46 | -- | 1.05 | 11501 | -- | -- |
| 191.11 | 0.648 | 8.46 | -0.218 | 1.59 | -- | 0.908 | -- | 0.635 | 5.39 | -- | -- | -- | -- |
| 193.14 | 0.651 | 8.46 | -0.216 | 1.6 | -- | -- | -- | 0.631 | 5.43 | -- | -- | -- | -- |
| 272.02 | 0.768 | 8.57 | -0.41 | -- | -1.07 | -- | -- | 0.192 | -- | 1.634 | 20155 | -- | -- |
| 150.56 | 0.571 | 8.48 | -- | 1.88 | -1.51 | -- | -- | 0.434 | 5.81 | 2.22 | 12399 | -- | -- |
| 326.66 | 0.845 | 8.48 | -0.162 | -- | -- | -- | -- | 0.67 | -- | -- | -- | -- | -- |
| 194.37 | 0.652 | 8.46 | -- | 1.6 | -- | -- | -- | 0.655 | 5.43 | -- | -- | -- | -- |
| 279.43 | 0.779 | 8.58 | -- | -- | -1.09 | -- | -- | 0.196 | -- | 2.24 | 21545 | -- | -- |
| 327.35 | 0.845 | 8.48 | -- | -- | -- | -- | -- | 0.688 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 120.97 | radiation | 20 | 14400 | < th | dose dependent | rect. | 17 | 13 |
| 2 | 120.98 | radiation | 1 | 14400 | > th | dose dependent | rect. | 17 | 13 |
| 7 | 121.78 | radiation | 1 | 14400 | > th | dose dependent | rect. | 17 | 2 |
| 22 | 121.99 | radiation | 40 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 72 | 122.58 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 77 | 122.92 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 79 | 122.98 | radiation | 40 | 14400 | < th | dose dependent | rect. | 1 | 5 |
| 91 | 123.12 | radiation | 40 | 14400 | < th | dose dependent | rect. | 23 | 7 |
| 99 | 123.21 | radiation | 30 | 14400 | < th | dose independent | rect. | 15 | 17 |
| 124 | 123.38 | radiation | 30 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 129 | 123.42 | radiation | 10 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 130 | 123.44 | radiation | 30 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 135 | 123.46 | radiation | 10 | 14400 | < th | dose independent | rect. | 16 | 13 |
| 137 | 123.47 | radiation | 30 | 14400 | < th | dose independent | rect. | 15 | 14 |
| 148 | 123.50 | radiation | 30 | 14400 | < th | dose independent | rect. | 15 | 9 |
| 154 | 123.51 | radiation | 10 | 14400 | < th | dose independent | rect. | 16 | 8 |
| 177 | 123.65 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 314 | 124.56 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 316 | 124.59 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 325 | 124.71 | radiation | 1 | 14400 | < th | dose dependent | sin | 13 | NA |
| 326 | 124.72 | humidity | 70 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 328 | 124.74 | humidity | 70 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 330 | 124.76 | temperature | 20 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 332 | 124.76 | radiation | 40 | 14400 | > th | dose dependent | rect. | 15 | 19 |
| 334 | 124.78 | radiation | 1 | 4320 | < th | dose independent | rect. | 12 | 18 |
| 340 | 124.84 | radiation | 1 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 347 | 124.87 | radiation | 1 | 14400 | > th | dose independent | rect. | 16 | 3 |
| 358 | 124.87 | radiation | 1 | 4320 | < th | dose dependent | rect. | 12 | 18 |
| 361 | 124.89 | radiation | 1 | 14400 | > th | dose independent | rect. | 16 | 14 |
| 362 | 124.89 | radiation | 40 | 14400 | > th | dose dependent | rect. | 8 | 2 |
| 421 | 124.96 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 429 | 124.98 | radiation | 1 | 14400 | < th | dose dependent | rect. | 17 | 17 |
| 465 | 125.06 | radiation | 1 | 4320 | < th | dose independent | rect. | 9 | 21 |
| 491 | 125.11 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 3 |
| 498 | 125.13 | radiation | 1 | 14400 | < th | dose independent | sin | 14 | NA |
| 503 | 125.14 | radiation | 1 | 14400 | > th | dose independent | sin | 14 | NA |
| 514 | 125.16 | radiation | 1 | 14400 | > th | dose independent | rect. | 8 | 22 |
| 516 | 125.17 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 3 |
| 535 | 125.20 | radiation | 1 | 4320 | < th | dose dependent | rect. | 9 | 21 |
| 538 | 125.21 | humidity | 90 | 43200 | < th | dose independent | rect. | 18 | 5 |
| 565 | 125.27 | radiation | 20 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 577 | 125.29 | radiation | 1 | 4320 | > th | dose independent | rect. | 12 | 18 |
| 624 | 125.36 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 655 | 125.42 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 2 |
| 656 | 125.42 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 733 | 125.55 | radiation | 1 | 14400 | < th | dose independent | rect. | 16 | 19 |
| 758 | 125.62 | radiation | 1 | 14400 | > th | dose independent | rect. | 16 | 19 |
| 770 | 125.64 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 10 |
| 798 | 125.68 | humidity | 90 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 841 | 125.72 | radiation | 40 | 14400 | < th | dose independent | rect. | 14 | 19 |
| 895 | 125.79 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 5 |
| 930 | 125.84 | radiation | 40 | 14400 | > th | dose dependent | sin | 12 | NA |
| 984 | 125.92 | radiation | 1 | 14400 | > th | dose independent | rect. | 8 | 11 |