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Os07g0267300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.5 (0.0254) R2 : 0.464
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.98 (0.151) R2dC : 2.91 R2C : -2.06
β3 : 3.53 (0.193) R2dE : 2.52 R2E : -2.44
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0412 (0.0528) R2dN8 : 0.00126 R2N8 : -0.00836
σ : 0.467
deviance : 100.34
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_____
C
peak time of C : 10.4
E
wheather : temperature
threshold : 42.4
memory length : 252
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 14.4
open length of G : 10.2

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
88.58 0.442 10.5 0.484 1.84 2.97 1.74 1.17 0.036 11.2 32.34 294 14.6 9.47
86.47 0.433 10.5 0.55 2.89 3.62 1.39 -- 0.0549 10.5 39.63 242 14.6 10.1
89 0.439 10.5 0.683 2.67 3.38 -- -0.873 0.0669 10.7 37.99 210 14.8 10.4
90.17 0.442 10.5 0.658 2.89 3.63 -- -- 0.0416 10.5 40 258 14.4 10.2
151.34 0.573 10.5 1.15 -- 1.34 -- -0.0413 0.16 -- 32.2 10173 14.4 12
157.07 0.588 10.6 0.266 0.495 -- 1.48 -- -0.155 12 -- -- -- --
166.23 0.604 10.6 0.327 0.498 -- -- -- -0.146 12.7 -- -- -- --
145.24 0.561 10.5 0.85 -- 1.39 -- -- 0.135 -- 47.07 2844 14.5 12
100.34 0.467 10.5 -- 2.98 3.53 -- -- -0.0412 10.4 42.4 252 14.4 10.2
181.73 0.63 10.6 0.309 -- -- -- -- -0.155 -- -- -- -- --
169.05 0.608 10.6 -- 0.493 -- -- -- -0.183 12.7 -- -- -- --
155.98 0.582 10.6 -- -- 1.11 -- -- -0.0964 -- 43.03 2800 15.3 7.08
184.25 0.634 10.6 -- -- -- -- -- -0.189 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 91.42 temperature 30.0 270 < th dose dependent rect. 15 9
3 92.70 temperature 20.0 720 > th dose dependent rect. 17 2
13 95.45 temperature 15.0 720 > th dose dependent rect. 16 5
37 98.57 temperature 30.0 10 < th dose dependent rect. 16 10
39 98.66 temperature 30.0 10 < th dose dependent rect. 18 8
42 98.77 temperature 10.0 270 > th dose dependent rect. 11 17
59 99.64 temperature 10.0 270 > th dose dependent rect. 14 14
79 101.08 temperature 25.0 720 > th dose independent rect. 17 2
91 101.78 temperature 10.0 10 > th dose dependent rect. 2 4
101 102.30 temperature 10.0 720 > th dose dependent rect. 11 10
114 102.73 temperature 25.0 720 > th dose independent rect. 16 4
129 103.28 temperature 15.0 270 > th dose dependent rect. 1 2
137 103.55 wind 5.0 10 < th dose dependent rect. 2 4
143 103.68 temperature 10.0 270 > th dose dependent rect. 24 5
149 103.81 temperature 10.0 720 > th dose dependent rect. 9 13
153 103.87 temperature 10.0 10 > th dose dependent rect. 14 16
156 103.92 temperature 25.0 720 > th dose dependent rect. 16 9
166 104.00 humidity 80.0 10 > th dose independent rect. 2 4
173 104.22 humidity 60.0 10 > th dose dependent rect. 2 4
182 104.34 temperature 25.0 270 < th dose independent rect. 15 9
191 104.46 wind 3.0 270 < th dose independent rect. 1 3
193 104.49 wind 7.0 270 < th dose dependent rect. 24 5
196 104.55 wind 3.0 270 < th dose independent rect. 24 5
226 104.97 temperature 25.0 720 > th dose dependent sin 14 NA
230 105.05 wind 5.0 270 < th dose dependent rect. 1 3
234 105.09 atmosphere 1015.0 1440 < th dose independent rect. 3 4
238 105.11 radiation 10.0 10 < th dose independent rect. 2 4
260 105.44 wind 9.0 10 < th dose independent rect. 2 4
261 105.44 temperature 10.0 10 > th dose independent rect. 2 4
263 105.44 temperature 30.0 10 < th dose independent rect. 2 4
264 105.44 humidity 50.0 10 > th dose independent rect. 2 4
267 105.44 atmosphere 995.0 10 > th dose independent rect. 2 4
268 105.44 atmosphere 1010.0 10 < th dose independent rect. 2 4
273 105.44 temperature 10.0 10 > th dose independent rect. 6 20
277 105.49 temperature 20.0 30 > th dose independent rect. 14 16
296 105.79 wind 9.0 10 < th dose independent rect. 6 20
298 105.81 radiation 40.0 10 < th dose dependent rect. 2 4
318 106.00 temperature 20.0 720 > th dose dependent sin 17 NA
323 106.07 humidity 80.0 270 > th dose independent rect. 1 2
348 106.23 precipitation 0.1 30 < th dose independent rect. 2 4
349 106.23 precipitation 0.1 30 < th dose dependent rect. 2 4
351 106.25 temperature 30.0 270 < th dose dependent rect. 21 1
353 106.26 humidity 60.0 270 > th dose dependent rect. 1 2
377 106.70 wind 9.0 1440 < th dose independent rect. 3 4
378 106.70 temperature 10.0 1440 > th dose independent rect. 3 4
381 106.70 temperature 30.0 1440 < th dose independent rect. 3 4
385 106.70 humidity 50.0 1440 > th dose independent rect. 3 4
390 106.70 atmosphere 995.0 1440 > th dose independent rect. 3 4
391 106.70 radiation 40.0 1440 < th dose independent rect. 3 4
395 106.70 temperature 10.0 1440 > th dose independent rect. 7 20
405 106.82 humidity 50.0 270 > th dose dependent rect. 24 5
414 106.89 temperature 30.0 270 < th dose dependent sin 16 NA
421 106.96 humidity 80.0 270 > th dose independent rect. 24 5
469 107.69 atmosphere 995.0 10 > th dose independent rect. 6 20
473 107.73 radiation 1.0 270 < th dose dependent rect. 24 11
474 107.75 radiation 1.0 270 < th dose dependent rect. 24 5
478 107.80 atmosphere 1010.0 270 < th dose independent rect. 24 5
484 107.82 radiation 1.0 270 < th dose independent rect. 24 5
486 107.82 temperature 30.0 720 < th dose dependent sin 19 NA
491 107.84 temperature 15.0 270 > th dose independent rect. 24 5
497 107.85 temperature 30.0 270 < th dose independent rect. 24 5
498 107.85 humidity 50.0 270 > th dose independent rect. 24 5
501 107.85 atmosphere 995.0 270 > th dose independent rect. 24 5
505 107.85 temperature 10.0 270 > th dose independent rect. 5 19
507 107.86 precipitation 0.1 270 < th dose independent rect. 1 2
509 107.86 precipitation 0.1 270 < th dose dependent rect. 1 2
518 107.92 temperature 20.0 270 > th dose independent rect. 1 2
522 107.95 precipitation 0.1 270 < th dose independent rect. 24 5
523 107.95 precipitation 0.1 270 < th dose dependent rect. 24 5
530 107.99 precipitation 0.1 10 < th dose independent rect. 6 20
531 107.99 precipitation 0.1 10 < th dose dependent rect. 6 20
533 108.02 wind 9.0 270 < th dose independent rect. 1 2
534 108.02 temperature 10.0 270 > th dose independent rect. 1 2
536 108.02 temperature 30.0 270 < th dose independent rect. 1 2
537 108.02 humidity 50.0 270 > th dose independent rect. 1 2
540 108.02 atmosphere 995.0 270 > th dose independent rect. 1 2
541 108.02 atmosphere 1010.0 270 < th dose independent rect. 1 2
543 108.02 radiation 1.0 270 < th dose independent rect. 1 2
548 108.02 temperature 10.0 270 > th dose independent rect. 3 22
549 108.02 radiation 1.0 270 < th dose dependent rect. 1 2
555 108.04 atmosphere 1015.0 10 < th dose dependent rect. 2 4
577 108.27 wind 9.0 270 < th dose independent rect. 5 19
619 108.48 temperature 25.0 720 > th dose independent sin 17 NA
653 108.74 temperature 10.0 270 > th dose dependent sin 15 NA
665 108.88 wind 9.0 270 < th dose independent rect. 4 21
732 109.51 humidity 80.0 10 > th dose dependent rect. 2 6
740 109.59 atmosphere 1015.0 270 < th dose dependent rect. 1 2
745 109.62 radiation 10.0 30 < th dose dependent rect. 2 6
747 109.63 radiation 1.0 270 < th dose independent rect. 24 11
802 109.91 radiation 1.0 270 < th dose independent rect. 24 7
806 109.92 humidity 50.0 270 > th dose dependent rect. 5 19
839 110.10 radiation 1.0 90 < th dose independent rect. 2 9
879 110.31 temperature 25.0 720 > th dose independent rect. 11 13
881 110.34 radiation 1.0 720 > th dose independent rect. 17 2
901 110.40 atmosphere 995.0 270 > th dose independent rect. 5 19
915 110.46 atmosphere 1015.0 270 < th dose dependent rect. 24 5