Os07g0265100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os07g0265100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20.22 | 0.211 | 11 | 0.0386 | 1.07 | -1.27 | -0.385 | 1.96 | -0.0676 | 14.1 | 15.39 | 1342 | -- | -- |
| 22.8 | 0.222 | 11 | -0.335 | 1.04 | -1.2 | -0.514 | -- | -0.171 | 14.3 | 11.76 | 2491 | -- | -- |
| 20.69 | 0.212 | 11 | 0.0609 | 1.04 | -1.26 | -- | 2.12 | -0.0612 | 14.2 | 15.67 | 1257 | -- | -- |
| 23.77 | 0.227 | 11 | -0.353 | 1.04 | -1.2 | -- | -- | -0.176 | 14.3 | 11.97 | 2468 | -- | -- |
| 76.44 | 0.407 | 11 | 0.00361 | -- | -1.69 | -- | 1.69 | -0.0518 | -- | 15.72 | 1075 | -- | -- |
| 51.06 | 0.335 | 11.1 | -0.799 | 1.16 | -- | -0.467 | -- | -0.417 | 14.1 | -- | -- | -- | -- |
| 51.88 | 0.337 | 11.1 | -0.813 | 1.16 | -- | -- | -- | -0.42 | 14.1 | -- | -- | -- | -- |
| 80.3 | 0.417 | 11 | -0.348 | -- | -1.62 | -- | -- | -0.161 | -- | 16.06 | 1076 | -- | -- |
| 24.99 | 0.233 | 11 | -- | 1.13 | -1.39 | -- | -- | -0.0272 | 14.2 | 10.32 | 7709 | -- | -- |
| 132.96 | 0.539 | 11.1 | -0.862 | -- | -- | -- | -- | -0.448 | -- | -- | -- | -- | -- |
| 69.31 | 0.389 | 11.1 | -- | 1.18 | -- | -- | -- | -0.33 | 14.1 | -- | -- | -- | -- |
| 82.37 | 0.423 | 11 | -- | -- | -1.92 | -- | -- | -0.0833 | -- | 11.08 | 1082 | -- | -- |
| 152.55 | 0.576 | 11.1 | -- | -- | -- | -- | -- | -0.352 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.56 | temperature | 10 | 720 | > th | dose dependent | rect. | 18 | 18 |
| 27 | 18.53 | temperature | 10 | 720 | > th | dose dependent | sin | 9 | NA |
| 57 | 19.16 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 16 |
| 113 | 19.31 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 9 |
| 133 | 19.35 | temperature | 30 | 1440 | < th | dose dependent | sin | 9 | NA |
| 134 | 19.35 | temperature | 15 | 1440 | > th | dose dependent | rect. | 24 | 11 |
| 172 | 19.41 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 9 |
| 676 | 20.31 | temperature | 15 | 1440 | > th | dose dependent | no | NA | NA |
| 677 | 20.31 | temperature | 10 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 713 | 20.35 | temperature | 30 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 754 | 20.38 | temperature | 15 | 1440 | > th | dose dependent | rect. | 24 | 23 |
| 768 | 20.39 | temperature | 15 | 1440 | > th | dose dependent | rect. | 7 | 23 |
| 795 | 20.42 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 828 | 20.45 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 23 |
| 852 | 20.48 | temperature | 25 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 865 | 20.48 | temperature | 30 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 875 | 20.50 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 893 | 20.51 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 23 |