Os07g0264000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0264000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 52.52 | 0.341 | 6.72 | -0.551 | 0.503 | -0.371 | 0.861 | -0.589 | 0.521 | 2.84 | 21.1 | 7 | -- | -- |
| 53.93 | 0.345 | 6.73 | -0.696 | 0.492 | -0.358 | 0.446 | -- | 0.495 | 3.06 | 20.7 | 6 | -- | -- |
| 54.19 | 0.345 | 6.73 | -0.655 | 0.499 | -0.353 | -- | -0.231 | 0.501 | 3.13 | 21.01 | 5 | -- | -- |
| 54.4 | 0.344 | 6.73 | -0.7 | 0.494 | -0.358 | -- | -- | 0.494 | 3.16 | 20.7 | 6 | -- | -- |
| 67.1 | 0.382 | 6.72 | -0.645 | -- | -0.237 | -- | -0.0886 | 0.539 | -- | 20.41 | 5 | -- | -- |
| 59.83 | 0.363 | 6.71 | -0.613 | 0.407 | -- | 0.381 | -- | 0.57 | 3.53 | -- | -- | -- | -- |
| 60.27 | 0.364 | 6.72 | -0.619 | 0.41 | -- | -- | -- | 0.568 | 3.63 | -- | -- | -- | -- |
| 67.12 | 0.382 | 6.73 | -0.662 | -- | -0.232 | -- | -- | 0.534 | -- | 20.4 | 4 | -- | -- |
| 67.11 | 0.382 | 6.73 | -- | 0.477 | -0.274 | -- | -- | 0.554 | 3.4 | 20.7 | 6 | -- | -- |
| 69.62 | 0.39 | 6.72 | -0.602 | -- | -- | -- | -- | 0.578 | -- | -- | -- | -- | -- |
| 70.38 | 0.392 | 6.7 | -- | 0.398 | -- | -- | -- | 0.636 | 3.64 | -- | -- | -- | -- |
| 78.1 | 0.412 | 6.71 | -- | -- | -0.145 | -- | -- | 0.619 | -- | 20.77 | 3 | -- | -- |
| 79.19 | 0.415 | 6.7 | -- | -- | -- | -- | -- | 0.645 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 51.61 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 11 | 19 |
| 100 | 53.15 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 101 | 53.15 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 102 | 53.18 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 103 | 53.18 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 136 | 53.46 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 3 |
| 141 | 53.48 | temperature | 25.0 | 10 | < th | dose dependent | sin | 14 | NA |
| 154 | 53.53 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 2 |
| 164 | 53.59 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 168 | 53.60 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 169 | 53.61 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 5 |
| 171 | 53.62 | temperature | 25.0 | 10 | < th | dose dependent | no | NA | NA |
| 173 | 53.62 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 177 | 53.63 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 181 | 53.64 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 183 | 53.67 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 2 |
| 184 | 53.67 | temperature | 20.0 | 10 | < th | dose independent | rect. | 9 | 21 |
| 185 | 53.67 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 2 |
| 186 | 53.67 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 195 | 53.69 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 200 | 53.71 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 22 | 2 |
| 204 | 53.72 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 233 | 53.79 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 277 | 53.94 | temperature | 20.0 | 10 | < th | dose independent | rect. | 17 | 13 |
| 282 | 53.94 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 289 | 53.96 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 4 |
| 361 | 54.14 | temperature | 20.0 | 10 | < th | dose independent | rect. | 17 | 20 |
| 441 | 54.30 | temperature | 20.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 451 | 54.31 | temperature | 20.0 | 10 | < th | dose independent | rect. | 23 | 23 |
| 455 | 54.32 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 462 | 54.33 | temperature | 20.0 | 10 | < th | dose independent | no | NA | NA |
| 467 | 54.33 | temperature | 20.0 | 10 | > th | dose independent | rect. | 9 | 23 |
| 475 | 54.34 | temperature | 20.0 | 10 | < th | dose independent | rect. | 21 | 23 |
| 477 | 54.35 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 17 | 4 |
| 484 | 54.36 | temperature | 20.0 | 10 | < th | dose independent | rect. | 19 | 23 |
| 499 | 54.39 | temperature | 20.0 | 10 | < th | dose independent | rect. | 1 | 23 |
| 528 | 54.43 | temperature | 20.0 | 10 | < th | dose independent | rect. | 5 | 23 |
| 540 | 54.44 | temperature | 20.0 | 10 | > th | dose independent | no | NA | NA |
| 551 | 54.46 | temperature | 20.0 | 10 | < th | dose independent | sin | 11 | NA |
| 584 | 54.51 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 695 | 54.65 | temperature | 20.0 | 10 | > th | dose independent | rect. | 14 | 23 |
| 701 | 54.66 | temperature | 20.0 | 10 | > th | dose independent | sin | 11 | NA |
| 702 | 54.66 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 4 |
| 757 | 54.71 | temperature | 20.0 | 10 | > th | dose independent | rect. | 5 | 23 |
| 771 | 54.73 | wind | 3.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 776 | 54.73 | temperature | 20.0 | 10 | > th | dose independent | rect. | 23 | 23 |
| 777 | 54.73 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 2 |
| 803 | 54.77 | temperature | 20.0 | 10 | > th | dose independent | rect. | 18 | 12 |
| 859 | 54.84 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 4 |
| 928 | 54.89 | temperature | 20.0 | 10 | > th | dose independent | rect. | 18 | 14 |
| 930 | 54.89 | temperature | 10.0 | 10 | > th | dose dependent | sin | 11 | NA |
| 944 | 54.90 | wind | 1.0 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 963 | 54.91 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 12 | 2 |
| 996 | 54.94 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |