Os07g0258800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0258800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 106.36 | 0.485 | 6.68 | 0.9 | 1.18 | 1.04 | 0.372 | 1.12 | 0.243 | 18.1 | 20.7 | 1295 | -- | -- |
| 108.61 | 0.485 | 6.7 | 0.799 | 1.08 | 0.979 | 0.0377 | -- | 0.236 | 17.6 | 20.8 | 900 | -- | -- |
| 106.56 | 0.481 | 6.68 | 0.894 | 1.18 | 1.02 | -- | 1.06 | 0.24 | 18.1 | 20.81 | 1255 | -- | -- |
| 107.49 | 0.483 | 6.71 | 0.71 | 1.14 | 0.87 | -- | -- | 0.206 | 17.9 | 20.71 | 899 | -- | -- |
| 164.13 | 0.597 | 6.69 | 0.87 | -- | 1.11 | -- | 0.964 | 0.139 | -- | 20.8 | 511 | -- | -- |
| 128.96 | 0.532 | 6.66 | 1.05 | 1.17 | -- | 0.471 | -- | 0.414 | 18.3 | -- | -- | -- | -- |
| 129.51 | 0.533 | 6.66 | 1.05 | 1.17 | -- | -- | -- | 0.415 | 18.3 | -- | -- | -- | -- |
| 157.89 | 0.585 | 6.66 | 0.824 | -- | 1.02 | -- | -- | 0.256 | -- | 28.2 | 472 | -- | -- |
| 117.07 | 0.504 | 6.76 | -- | 1.17 | 1.17 | -- | -- | 0.0598 | 18.1 | 21 | 2488 | -- | -- |
| 200.44 | 0.662 | 6.64 | 1.02 | -- | -- | -- | -- | 0.39 | -- | -- | -- | -- | -- |
| 158.45 | 0.589 | 6.69 | -- | 1.15 | -- | -- | -- | 0.299 | 18.3 | -- | -- | -- | -- |
| 176.03 | 0.618 | 6.68 | -- | -- | 1.09 | -- | -- | 0.169 | -- | 28.2 | 489 | -- | -- |
| 227.7 | 0.704 | 6.67 | -- | -- | -- | -- | -- | 0.277 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 104.60 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 2 | 105.18 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 5 | 105.83 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 6 | 106.29 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 7 | 106.29 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 8 | 106.47 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 9 | 106.49 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 12 | 106.59 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 13 | 106.65 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 15 | 106.74 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 20 | 11 |
| 26 | 107.00 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 34 | 107.12 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 20 | 11 |
| 76 | 107.66 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 84 | 107.74 | temperature | 20.0 | 1440 | > th | dose independent | sin | 10 | NA |
| 99 | 107.85 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 108 | 107.89 | temperature | 20.0 | 720 | > th | dose independent | rect. | 14 | 19 |
| 149 | 108.18 | temperature | 20.0 | 1440 | < th | dose independent | sin | 9 | NA |
| 172 | 108.28 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 344 | 108.87 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 20 |
| 494 | 109.26 | wind | 9.0 | 14400 | < th | dose independent | rect. | 5 | 8 |
| 496 | 109.27 | temperature | 20.0 | 1440 | > th | dose independent | no | NA | NA |
| 498 | 109.27 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 20 |
| 553 | 109.40 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 23 | 21 |
| 601 | 109.53 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 23 | 13 |
| 664 | 109.67 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 686 | 109.73 | temperature | 20.0 | 1440 | < th | dose independent | no | NA | NA |
| 689 | 109.73 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 22 | 8 |
| 694 | 109.76 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 24 | 12 |
| 698 | 109.79 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 745 | 109.89 | wind | 9.0 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 790 | 109.99 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 17 | 15 |
| 800 | 110.00 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 16 | 18 |
| 914 | 110.22 | temperature | 25.0 | 720 | < th | dose dependent | sin | 11 | NA |
| 936 | 110.25 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 953 | 110.28 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 960 | 110.29 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 10 |