Os07g0258700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : BTB domain containing protein.
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Os07g0258700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : BTB domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.22 | 0.241 | 9.85 | 0.82 | 0.461 | 0.391 | -0.201 | 1.12 | 0.232 | 22 | 65.2 | 5528 | -- | -- |
| 27.54 | 0.244 | 9.86 | 0.835 | 0.473 | 0.441 | -0.253 | -- | 0.222 | 22.1 | 67.8 | 4053 | -- | -- |
| 26.37 | 0.239 | 9.85 | 0.828 | 0.465 | 0.391 | -- | 1.15 | 0.233 | 21.9 | 65.15 | 5508 | -- | -- |
| 27.77 | 0.245 | 9.86 | 0.843 | 0.472 | 0.438 | -- | -- | 0.224 | 22 | 67.7 | 4077 | -- | -- |
| 38.64 | 0.29 | 9.83 | 0.776 | -- | 0.415 | -- | 1.06 | 0.267 | -- | 66 | 7179 | -- | -- |
| 31.02 | 0.261 | 9.85 | 0.837 | 0.439 | -- | -0.268 | -- | 0.255 | 21.9 | -- | -- | -- | -- |
| 31.27 | 0.262 | 9.85 | 0.848 | 0.442 | -- | -- | -- | 0.256 | 21.7 | -- | -- | -- | -- |
| 39.03 | 0.291 | 9.86 | 0.83 | -- | 0.48 | -- | -- | 0.165 | -- | 66 | 4404 | -- | -- |
| 33.51 | 0.27 | 9.91 | -- | 0.443 | 0.812 | -- | -- | 0.069 | 22 | 57.59 | 29331 | -- | -- |
| 42.89 | 0.306 | 9.84 | 0.852 | -- | -- | -- | -- | 0.255 | -- | -- | -- | -- | -- |
| 50.22 | 0.332 | 9.87 | -- | 0.444 | -- | -- | -- | 0.161 | 21.9 | -- | -- | -- | -- |
| 45.05 | 0.313 | 9.9 | -- | -- | 0.807 | -- | -- | 0.0632 | -- | 58 | 28932 | -- | -- |
| 62.04 | 0.368 | 9.86 | -- | -- | -- | -- | -- | 0.161 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.73 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 5 |
| 7 | 24.86 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 6 |
| 14 | 24.92 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 38 | 25.20 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 8 | 2 |
| 43 | 25.24 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 7 | 5 |
| 56 | 25.33 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 6 |
| 57 | 25.35 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 4 |
| 67 | 25.43 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 70 | 25.44 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 6 |
| 78 | 25.47 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 1 | 5 |
| 113 | 25.61 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 22 | 9 |
| 119 | 25.62 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 6 |
| 123 | 25.63 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 162 | 25.72 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 166 | 25.72 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 4 |
| 195 | 25.78 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 7 |
| 201 | 25.78 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 7 |
| 208 | 25.79 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 3 | 8 |
| 226 | 25.82 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 228 | 25.82 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 232 | 25.83 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 233 | 25.83 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 268 | 25.89 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 277 | 25.90 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 316 | 25.95 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 318 | 25.95 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 380 | 26.02 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 431 | 26.09 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 13 |
| 432 | 26.09 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 13 |
| 440 | 26.09 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 13 |
| 443 | 26.10 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 19 | 17 |
| 448 | 26.11 | humidity | 80.0 | 1440 | > th | dose independent | sin | 5 | NA |
| 456 | 26.11 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 9 | 1 |
| 464 | 26.12 | humidity | 80.0 | 1440 | < th | dose independent | sin | 5 | NA |
| 492 | 26.15 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 3 |
| 493 | 26.15 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 10 |
| 502 | 26.16 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 511 | 26.16 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 13 |
| 525 | 26.19 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 531 | 26.19 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 3 |
| 544 | 26.20 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 10 |
| 553 | 26.20 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 10 |
| 592 | 26.23 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 3 |
| 609 | 26.25 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 623 | 26.26 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 626 | 26.26 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 632 | 26.27 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 668 | 26.29 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 19 | 17 |
| 691 | 26.30 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 8 |
| 705 | 26.32 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 706 | 26.32 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 731 | 26.34 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 743 | 26.35 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 746 | 26.35 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 14 | 20 |
| 754 | 26.36 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 8 |
| 847 | 26.42 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 3 |
| 879 | 26.43 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 16 |
| 880 | 26.43 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 16 |
| 890 | 26.43 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 16 |
| 912 | 26.45 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 19 |
| 924 | 26.46 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 14 | 3 |
| 940 | 26.47 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 6 | NA |