Os07g0253000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0253000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 78.79 | 0.417 | 10.6 | -1.96 | 0.353 | 1.9 | -0.641 | -4.93 | -0.179 | 10.9 | 20.15 | 1396 | -- | -- |
| 94.74 | 0.453 | 10.5 | -0.583 | 0.405 | 2.25 | -0.466 | -- | 0.216 | 10.8 | 14.8 | 1292 | -- | -- |
| 80.25 | 0.417 | 10.7 | -2.04 | 0.335 | 1.88 | -- | -5.02 | -0.201 | 9.79 | 20.31 | 1494 | -- | -- |
| 95.15 | 0.454 | 10.5 | -0.616 | 0.522 | 2.36 | -- | -- | 0.197 | 11 | 14.5 | 1177 | -- | -- |
| 86.97 | 0.434 | 10.7 | -2.01 | -- | 1.86 | -- | -4.92 | -0.187 | -- | 20.21 | 1503 | -- | -- |
| 183.18 | 0.635 | 10.4 | 0.103 | 0.298 | -- | -0.464 | -- | 0.613 | 9.53 | -- | -- | -- | -- |
| 183.9 | 0.635 | 10.4 | 0.0841 | 0.306 | -- | -- | -- | 0.611 | 9.04 | -- | -- | -- | -- |
| 103.25 | 0.473 | 10.5 | -0.633 | -- | 2.23 | -- | -- | 0.198 | -- | 14.27 | 1464 | -- | -- |
| 103.93 | 0.475 | 10.4 | -- | 0.553 | 2.12 | -- | -- | 0.305 | 10.8 | 12.47 | 1114 | -- | -- |
| 189.28 | 0.643 | 10.4 | 0.0836 | -- | -- | -- | -- | 0.613 | -- | -- | -- | -- | -- |
| 184.08 | 0.635 | 10.4 | -- | 0.306 | -- | -- | -- | 0.602 | 9.02 | -- | -- | -- | -- |
| 112.37 | 0.494 | 10.5 | -- | -- | 1.97 | -- | -- | 0.308 | -- | 12.91 | 1451 | -- | -- |
| 189.46 | 0.642 | 10.4 | -- | -- | -- | -- | -- | 0.604 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 75.54 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 9 |
| 7 | 76.24 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 9 |
| 14 | 76.84 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 7 |
| 15 | 76.85 | temperature | 20 | 1440 | > th | dose dependent | sin | 16 | NA |
| 17 | 76.89 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 10 |
| 24 | 76.99 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 19 |
| 29 | 77.08 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 16 |
| 46 | 77.27 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 69 | 77.55 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 109 | 78.08 | wind | 5 | 43200 | > th | dose independent | sin | 18 | NA |
| 112 | 78.12 | wind | 1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 125 | 78.24 | wind | 3 | 43200 | > th | dose dependent | rect. | 13 | 10 |
| 126 | 78.26 | wind | 5 | 43200 | < th | dose independent | sin | 18 | NA |
| 131 | 78.34 | wind | 9 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 172 | 78.79 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 197 | 78.93 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 23 |
| 204 | 79.01 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 226 | 79.13 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 234 | 79.15 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 326 | 79.83 | wind | 3 | 43200 | > th | dose dependent | sin | 19 | NA |
| 431 | 80.92 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 6 |
| 434 | 80.95 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 3 |
| 442 | 81.06 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 7 |
| 481 | 81.27 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 527 | 81.53 | wind | 3 | 43200 | > th | dose dependent | rect. | 10 | 7 |
| 576 | 81.72 | temperature | 25 | 1440 | < th | dose independent | rect. | 9 | 15 |
| 578 | 81.72 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 591 | 81.76 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 10 |
| 600 | 81.79 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 610 | 81.82 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 612 | 81.83 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 649 | 81.95 | wind | 3 | 43200 | > th | dose dependent | rect. | 11 | 5 |
| 653 | 81.96 | temperature | 30 | 1440 | < th | dose dependent | sin | 16 | NA |
| 705 | 82.16 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 10 |
| 711 | 82.18 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 18 |
| 757 | 82.30 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 792 | 82.43 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 20 |
| 793 | 82.44 | temperature | 30 | 1440 | < th | dose dependent | rect. | 13 | 16 |
| 808 | 82.47 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 22 |
| 895 | 82.74 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 18 |
| 940 | 82.88 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 961 | 82.93 | temperature | 25 | 1440 | > th | dose independent | rect. | 9 | 15 |