Os07g0252400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cellulose synthase-8.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0252400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Cellulose synthase-8.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 329.75 | 0.853 | 9.59 | -3.53 | 0.635 | 2.69 | -1.2 | -4.48 | -0.297 | 12.4 | 26.3 | 970 | 7.71 | -- |
| 332.86 | 0.85 | 9.51 | -2.78 | 0.62 | 2.25 | -1.03 | -- | -0.215 | 12.4 | 26.18 | 981 | 7.83 | -- |
| 335.27 | 0.853 | 9.57 | -3.4 | 0.646 | 2.6 | -- | -3.44 | -0.263 | 11.8 | 26.36 | 967 | 7.63 | -- |
| 336.56 | 0.854 | 9.5 | -2.8 | 0.626 | 2.25 | -- | -- | -0.188 | 11.9 | 26.28 | 968 | 7.86 | -- |
| 353.56 | 0.876 | 9.58 | -3.37 | -- | 2.35 | -- | -3.38 | -0.225 | -- | 27.12 | 1096 | 7.99 | -- |
| 492.95 | 1.04 | 9.52 | -2.24 | 0.143 | -- | 2.19 | -- | -0.258 | 3.44 | -- | -- | -- | -- |
| 504.33 | 1.05 | 9.52 | -2.28 | 0.308 | -- | -- | -- | -0.272 | 7.09 | -- | -- | -- | -- |
| 354.64 | 0.877 | 9.5 | -2.77 | -- | 1.96 | -- | -- | -0.117 | -- | 27.28 | 1077 | 7.86 | -- |
| 533.09 | 1.08 | 9.42 | -- | 0.496 | 1.77 | -- | -- | 0.183 | 11.5 | 27.14 | 949 | 6.85 | -- |
| 509.33 | 1.05 | 9.53 | -2.28 | -- | -- | -- | -- | -0.266 | -- | -- | -- | -- | -- |
| 641.58 | 1.18 | 9.47 | -- | 0.286 | -- | -- | -- | -0.0177 | 7.6 | -- | -- | -- | -- |
| 543.54 | 1.09 | 9.41 | -- | -- | 1.49 | -- | -- | 0.26 | -- | 30.6 | 1010 | 6.38 | -- |
| 645.99 | 1.19 | 9.47 | -- | -- | -- | -- | -- | -0.0138 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 342.37 | temperature | 30 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 44 | 350.79 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 47 | 351.51 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 48 | 352.05 | humidity | 70 | 1440 | < th | dose independent | rect. | 18 | 13 |
| 50 | 352.41 | humidity | 70 | 1440 | < th | dose independent | rect. | 18 | 2 |
| 82 | 354.32 | temperature | 30 | 720 | > th | dose independent | rect. | 18 | 1 |
| 100 | 356.53 | humidity | 70 | 720 | < th | dose dependent | rect. | 18 | 2 |
| 128 | 357.01 | temperature | 30 | 1440 | > th | dose dependent | sin | 12 | NA |
| 214 | 359.07 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 236 | 359.78 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 15 |
| 244 | 360.15 | radiation | 10 | 1440 | < th | dose dependent | rect. | 18 | 9 |
| 248 | 360.32 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 9 |
| 318 | 361.65 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 7 |
| 321 | 361.68 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 13 |
| 330 | 362.05 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 5 |
| 331 | 362.06 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 3 |
| 369 | 362.65 | radiation | 10 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 394 | 363.04 | temperature | 30 | 1440 | > th | dose independent | sin | 12 | NA |
| 395 | 363.04 | temperature | 30 | 1440 | < th | dose independent | sin | 12 | NA |
| 397 | 363.08 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 10 |
| 402 | 363.14 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 8 |
| 408 | 363.30 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 6 |
| 409 | 363.34 | radiation | 30 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 412 | 363.34 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 4 |
| 442 | 363.40 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 11 |
| 455 | 363.68 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 15 |
| 456 | 363.71 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 11 |
| 492 | 363.93 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 588 | 364.03 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 9 |
| 625 | 364.55 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 7 |
| 628 | 364.70 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 5 |
| 631 | 364.75 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 635 | 364.77 | radiation | 1 | 720 | > th | dose dependent | rect. | 18 | 11 |
| 672 | 365.11 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 730 | 365.63 | radiation | 30 | 1440 | < th | dose independent | rect. | 19 | 13 |
| 734 | 365.79 | radiation | 20 | 1440 | > th | dose dependent | rect. | 16 | 16 |
| 743 | 366.08 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 21 |
| 763 | 366.33 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 1 |
| 780 | 366.56 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 19 |
| 788 | 366.71 | radiation | 1 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 829 | 366.94 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 12 |
| 853 | 367.03 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 9 |
| 856 | 367.07 | temperature | 30 | 1440 | > th | dose independent | rect. | 15 | 21 |
| 866 | 367.23 | radiation | 30 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 888 | 367.41 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 7 |
| 889 | 367.42 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 5 |
| 909 | 367.64 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 16 |
| 910 | 367.64 | temperature | 30 | 1440 | > th | dose independent | rect. | 17 | 19 |
| 967 | 368.12 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 18 |
| 968 | 368.13 | radiation | 1 | 1440 | < th | dose independent | rect. | 18 | 9 |
| 971 | 368.14 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 16 |
| 981 | 368.20 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 14 |
| 982 | 368.20 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 22 |