Os07g0252000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : WD40-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
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Os07g0252000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : WD40-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.14 | 0.206 | 9.71 | -0.176 | 0.39 | -0.458 | -0.104 | 0.745 | 0.0577 | 8.51 | 19.7 | 2401 | -- | -- |
| 19.72 | 0.207 | 9.69 | -0.0566 | 0.39 | -0.599 | -0.00927 | -- | 0.113 | 8.49 | 18.7 | 2601 | -- | -- |
| 19.11 | 0.204 | 9.71 | -0.187 | 0.381 | -0.493 | -- | 0.71 | 0.0574 | 8.58 | 19.22 | 2565 | -- | -- |
| 19.59 | 0.206 | 9.68 | -0.0728 | 0.396 | -0.649 | -- | -- | 0.107 | 8.5 | 18.69 | 2520 | -- | -- |
| 26.89 | 0.242 | 9.71 | -0.167 | -- | -0.511 | -- | 0.638 | 0.0653 | -- | 19.2 | 2751 | -- | -- |
| 26.73 | 0.242 | 9.65 | 0.229 | 0.374 | -- | -0.127 | -- | 0.214 | 8.11 | -- | -- | -- | -- |
| 26.77 | 0.242 | 9.65 | 0.226 | 0.374 | -- | -- | -- | 0.215 | 8.23 | -- | -- | -- | -- |
| 26.96 | 0.242 | 9.69 | -0.113 | -- | -0.742 | -- | -- | 0.0769 | -- | 18.5 | 2773 | -- | -- |
| 19.7 | 0.207 | 9.68 | -- | 0.374 | -0.637 | -- | -- | 0.104 | 8.64 | 18.63 | 2575 | -- | -- |
| 34.48 | 0.274 | 9.66 | 0.229 | -- | -- | -- | -- | 0.219 | -- | -- | -- | -- | -- |
| 28.11 | 0.248 | 9.66 | -- | 0.375 | -- | -- | -- | 0.19 | 8.19 | -- | -- | -- | -- |
| 27.2 | 0.243 | 9.69 | -- | -- | -0.692 | -- | -- | 0.107 | -- | 18.34 | 2770 | -- | -- |
| 35.86 | 0.28 | 9.67 | -- | -- | -- | -- | -- | 0.194 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.19 | wind | 9 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 4 | 19.30 | wind | 7 | 43200 | < th | dose dependent | rect. | 22 | 6 |
| 6 | 19.33 | wind | 9 | 43200 | < th | dose dependent | rect. | 22 | 9 |
| 8 | 19.36 | humidity | 90 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 12 | 19.37 | temperature | 20 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 23 | 19.40 | wind | 1 | 43200 | > th | dose dependent | rect. | 21 | 10 |
| 33 | 19.44 | wind | 1 | 43200 | > th | dose dependent | rect. | 22 | 6 |
| 43 | 19.47 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 54 | 19.49 | wind | 3 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 55 | 19.49 | wind | 3 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 69 | 19.53 | wind | 1 | 14400 | > th | dose independent | rect. | 23 | 3 |
| 77 | 19.55 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 12 |
| 96 | 19.58 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 12 |
| 99 | 19.59 | wind | 3 | 43200 | > th | dose independent | sin | 9 | NA |
| 103 | 19.59 | wind | 1 | 43200 | > th | dose dependent | sin | 10 | NA |
| 104 | 19.59 | wind | 9 | 43200 | < th | dose dependent | sin | 9 | NA |
| 113 | 19.60 | wind | 3 | 43200 | > th | dose independent | rect. | 23 | 14 |
| 114 | 19.60 | wind | 3 | 43200 | > th | dose independent | rect. | 21 | 15 |
| 126 | 19.61 | temperature | 20 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 133 | 19.61 | wind | 3 | 43200 | < th | dose independent | rect. | 22 | 15 |
| 135 | 19.61 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 136 | 19.61 | wind | 9 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 148 | 19.62 | humidity | 80 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 151 | 19.62 | wind | 1 | 43200 | > th | dose dependent | rect. | 23 | 4 |
| 156 | 19.63 | wind | 3 | 43200 | < th | dose independent | sin | 8 | NA |
| 225 | 19.67 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 12 |
| 237 | 19.68 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 12 |
| 262 | 19.70 | wind | 3 | 43200 | > th | dose independent | rect. | 5 | 5 |
| 292 | 19.72 | wind | 3 | 43200 | > th | dose independent | rect. | 23 | 5 |
| 293 | 19.72 | wind | 3 | 43200 | < th | dose independent | rect. | 5 | 5 |
| 297 | 19.72 | wind | 3 | 43200 | > th | dose independent | rect. | 21 | 7 |
| 417 | 19.79 | wind | 3 | 43200 | < th | dose independent | rect. | 21 | 7 |
| 457 | 19.81 | humidity | 90 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 490 | 19.83 | radiation | 20 | 14400 | < th | dose independent | rect. | 23 | 7 |
| 547 | 19.86 | radiation | 20 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 579 | 19.88 | wind | 3 | 43200 | < th | dose independent | rect. | 23 | 4 |
| 608 | 19.90 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 7 |
| 627 | 19.91 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 629 | 19.91 | temperature | 20 | 1440 | < th | dose independent | rect. | 16 | 12 |
| 638 | 19.91 | humidity | 80 | 14400 | > th | dose dependent | rect. | 10 | 9 |
| 651 | 19.92 | temperature | 20 | 1440 | < th | dose independent | rect. | 16 | 18 |
| 676 | 19.93 | temperature | 20 | 1440 | > th | dose independent | rect. | 16 | 12 |
| 677 | 19.93 | temperature | 20 | 1440 | < th | dose independent | rect. | 16 | 16 |
| 708 | 19.94 | temperature | 20 | 1440 | > th | dose independent | rect. | 16 | 18 |
| 735 | 19.95 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 16 |
| 765 | 19.96 | temperature | 20 | 1440 | > th | dose independent | rect. | 16 | 16 |
| 794 | 19.97 | temperature | 20 | 1440 | < th | dose independent | sin | 13 | NA |
| 812 | 19.97 | temperature | 20 | 1440 | > th | dose independent | rect. | 19 | 18 |
| 880 | 19.99 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 16 |
| 914 | 20.00 | temperature | 20 | 1440 | > th | dose independent | sin | 13 | NA |