Os07g0244600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transferase family protein.
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Os07g0244600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 297.26 | 0.81 | 5 | 0.319 | 1.93 | 2.69 | 2.9 | -1.81 | -0.189 | 6.77 | 32.41 | 228 | 15.9 | 19.5 |
| 301.29 | 0.808 | 5.02 | 0.186 | 1.99 | 2.63 | 2.21 | -- | -0.233 | 6.74 | 32.82 | 204 | 15.8 | 19.7 |
| 314.03 | 0.825 | 5.03 | 0.241 | 1.94 | 2.79 | -- | -0.409 | -0.243 | 6.88 | 33.26 | 196 | 15.8 | 19.7 |
| 314.05 | 0.825 | 5.03 | 0.134 | 1.96 | 2.71 | -- | -- | -0.267 | 6.81 | 32.94 | 197 | 15.8 | 19.8 |
| 378.34 | 0.906 | 5.09 | -0.0146 | -- | 4.27 | -- | 1.04 | -0.307 | -- | 44.72 | 462 | 15.8 | 18.3 |
| 382.23 | 0.917 | 5.11 | -0.39 | 2.92 | -- | 2.02 | -- | -0.647 | 5.81 | -- | -- | -- | -- |
| 391.92 | 0.927 | 5.11 | -0.378 | 2.93 | -- | -- | -- | -0.656 | 5.73 | -- | -- | -- | -- |
| 379.81 | 0.908 | 5.08 | 0.172 | -- | 4.33 | -- | -- | -0.21 | -- | 44.1 | 470 | 15.7 | 18.4 |
| 314.34 | 0.826 | 5.04 | -- | 1.98 | 2.71 | -- | -- | -0.292 | 6.84 | 33.34 | 195 | 15.8 | 19.8 |
| 837.21 | 1.35 | 5.16 | -0.286 | -- | -- | -- | -- | -0.587 | -- | -- | -- | -- | -- |
| 395.69 | 0.931 | 5.11 | -- | 2.92 | -- | -- | -- | -0.614 | 5.73 | -- | -- | -- | -- |
| 379.97 | 0.908 | 5.08 | -- | -- | 4.31 | -- | -- | -0.244 | -- | 44.71 | 491 | 15.6 | 18.2 |
| 839.37 | 1.35 | 5.15 | -- | -- | -- | -- | -- | -0.555 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 300.33 | temperature | 30 | 270 | < th | dose dependent | rect. | 16 | 19 |
| 21 | 309.70 | temperature | 10 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 36 | 314.00 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 63 | 317.16 | temperature | 15 | 270 | > th | dose dependent | rect. | 22 | 17 |
| 65 | 317.51 | temperature | 20 | 720 | < th | dose independent | rect. | 16 | 11 |
| 88 | 318.42 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 15 |
| 93 | 318.53 | temperature | 20 | 720 | < th | dose independent | sin | 15 | NA |
| 100 | 318.73 | temperature | 20 | 720 | < th | dose independent | rect. | 19 | 7 |
| 116 | 319.36 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 122 | 319.56 | temperature | 20 | 270 | > th | dose independent | rect. | 20 | 22 |
| 139 | 320.63 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 23 |
| 148 | 320.90 | temperature | 20 | 720 | > th | dose independent | rect. | 20 | 7 |
| 156 | 321.08 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 160 | 321.14 | temperature | 10 | 270 | > th | dose dependent | sin | 7 | NA |
| 190 | 321.84 | temperature | 15 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 191 | 321.91 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 204 | 322.30 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 19 |
| 247 | 323.11 | temperature | 30 | 270 | < th | dose dependent | sin | 9 | NA |
| 266 | 323.38 | temperature | 20 | 270 | > th | dose independent | rect. | 22 | 17 |
| 275 | 323.55 | temperature | 20 | 720 | > th | dose independent | sin | 16 | NA |
| 277 | 323.56 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 282 | 323.63 | temperature | 20 | 270 | < th | dose independent | rect. | 17 | 16 |
| 300 | 324.00 | temperature | 15 | 30 | > th | dose dependent | rect. | 23 | 19 |
| 317 | 324.27 | temperature | 20 | 720 | > th | dose independent | rect. | 6 | 20 |
| 341 | 324.69 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 12 |
| 351 | 324.81 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 10 |
| 354 | 324.82 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 390 | 325.32 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 16 |
| 401 | 325.56 | temperature | 20 | 10 | > th | dose independent | rect. | 12 | 16 |
| 417 | 325.84 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 3 |
| 443 | 326.16 | temperature | 10 | 720 | > th | dose dependent | sin | 10 | NA |
| 456 | 326.25 | temperature | 25 | 720 | < th | dose dependent | sin | 14 | NA |
| 470 | 326.38 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 19 |
| 498 | 326.70 | temperature | 20 | 720 | > th | dose independent | rect. | 20 | 11 |
| 509 | 326.78 | temperature | 20 | 720 | > th | dose independent | rect. | 17 | 16 |
| 552 | 327.17 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 20 |
| 574 | 327.32 | temperature | 15 | 30 | > th | dose dependent | rect. | 1 | 17 |
| 594 | 327.53 | temperature | 20 | 270 | > th | dose independent | rect. | 10 | 23 |
| 617 | 327.66 | temperature | 20 | 720 | > th | dose independent | rect. | 17 | 10 |
| 711 | 328.32 | temperature | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 763 | 328.70 | temperature | 20 | 270 | > th | dose independent | rect. | 17 | 23 |
| 866 | 329.27 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |