Os07g0243100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Mitochondrial import inner membrane translocase subunit Tim10.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0243100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Mitochondrial import inner membrane translocase subunit Tim10.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35.6 | 0.28 | 10.5 | -0.56 | 0.235 | 0.369 | 0.179 | 3.18 | -0.0954 | 2.71 | 29.78 | 1757 | -- | -- |
| 37.21 | 0.284 | 10.5 | -0.011 | 0.233 | 0.692 | 0.263 | -- | -0.0772 | 3.08 | 30.49 | 1703 | -- | -- |
| 35.63 | 0.278 | 10.5 | -0.603 | 0.227 | 0.371 | -- | 3.28 | -0.0937 | 2.41 | 29.62 | 1828 | -- | -- |
| 36.87 | 0.283 | 10.5 | -0.00484 | 0.208 | 0.656 | -- | -- | 0.0228 | 2.98 | 29.7 | 1712 | -- | -- |
| 38.55 | 0.289 | 10.5 | -0.602 | -- | 0.38 | -- | 3.19 | -0.0868 | -- | 29.58 | 1856 | -- | -- |
| 54.02 | 0.345 | 10.5 | -0.171 | 0.238 | -- | 0.19 | -- | 0.0258 | 3.45 | -- | -- | -- | -- |
| 54.13 | 0.345 | 10.5 | -0.174 | 0.238 | -- | -- | -- | 0.0247 | 3.37 | -- | -- | -- | -- |
| 39.37 | 0.292 | 10.5 | 0.0271 | -- | 0.732 | -- | -- | 0.0141 | -- | 29.7 | 1807 | -- | -- |
| 36.76 | 0.282 | 10.5 | -- | 0.201 | 0.691 | -- | -- | 0.0107 | 2.42 | 29.6 | 1748 | -- | -- |
| 57.32 | 0.354 | 10.5 | -0.164 | -- | -- | -- | -- | 0.031 | -- | -- | -- | -- | -- |
| 54.92 | 0.347 | 10.5 | -- | 0.235 | -- | -- | -- | 0.0441 | 3.37 | -- | -- | -- | -- |
| 39.32 | 0.292 | 10.5 | -- | -- | 0.713 | -- | -- | 0.031 | -- | 29.56 | 1787 | -- | -- |
| 58.03 | 0.356 | 10.5 | -- | -- | -- | -- | -- | 0.0492 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 35.65 | temperature | 25 | 1440 | > th | dose dependent | rect. | 24 | 11 |
| 3 | 35.73 | temperature | 25 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 16 | 35.91 | temperature | 25 | 720 | > th | dose dependent | rect. | 20 | 15 |
| 31 | 36.22 | temperature | 30 | 1440 | < th | dose independent | sin | 6 | NA |
| 41 | 36.29 | temperature | 30 | 1440 | < th | dose independent | rect. | 3 | 11 |
| 50 | 36.32 | temperature | 30 | 1440 | < th | dose independent | rect. | 8 | 6 |
| 55 | 36.32 | temperature | 30 | 1440 | < th | dose independent | rect. | 20 | 18 |
| 73 | 36.36 | temperature | 30 | 1440 | > th | dose independent | sin | 6 | NA |
| 74 | 36.36 | temperature | 30 | 1440 | > th | dose independent | rect. | 8 | 7 |
| 90 | 36.39 | temperature | 25 | 720 | > th | dose dependent | sin | 8 | NA |
| 183 | 36.57 | temperature | 30 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 191 | 36.60 | temperature | 30 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 213 | 36.63 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 261 | 36.74 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 262 | 36.74 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 312 | 36.80 | temperature | 30 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 469 | 37.03 | temperature | 25 | 4320 | > th | dose dependent | rect. | 19 | 2 |
| 495 | 37.07 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 23 |
| 562 | 37.14 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 604 | 37.14 | temperature | 30 | 1440 | < th | dose independent | rect. | 8 | 22 |
| 610 | 37.14 | temperature | 30 | 1440 | < th | dose independent | rect. | 22 | 23 |
| 612 | 37.15 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 728 | 37.15 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 23 |
| 948 | 37.35 | temperature | 15 | 4320 | > th | dose dependent | rect. | 18 | 1 |