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Os07g0240600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.48 (0.0547) R2 : 0.696
β1 : -0.137 (0.397) R2dD : 0.000803 R2D : -0.0195
β2 : 2.25 (0.0887) R2dC : 0.439 R2C : 0.405
β3 : -0.9 (0.257) R2dE : 0.0586 R2E : -0.101
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 12.6 (2.05) R2dD*E : 0.357 R2D*E : 0.176
γ1 : -0.292 (0.0767) R2dN8 : 0.0139 R2N8 : -0.0691
σ : 0.649
deviance : 194.23
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_____
C
peak time of C : 8.09
E
wheather : temperature
threshold : 30.08
memory length : 4902
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
193.67 0.654 7.48 -0.125 2.25 -0.904 -0.439 12.6 -0.293 8.07 30.1 4902 -- --
220.82 0.697 7.76 -2.3 2.27 0.189 -0.516 -- -0.439 7.9 30.1 4902 -- --
194.23 0.649 7.48 -0.137 2.25 -0.9 -- 12.6 -0.292 8.09 30.08 4902 -- --
211.51 0.677 7.78 -2.42 2.22 0.464 -- -- -0.497 7.87 30.4 7098 -- --
464.39 1 7.51 0.458 -- -1.11 -- 12.3 -0.00724 -- 29.4 5084 -- --
221.95 0.698 7.77 -2.28 2.25 -- -0.529 -- -0.444 7.98 -- -- -- --
222.77 0.699 7.77 -2.3 2.25 -- -- -- -0.443 8.01 -- -- -- --
479.44 1.02 7.82 -2.64 -- 0.573 -- -- -0.438 -- 30.2 5766 -- --
359.53 0.883 7.71 -- 2.23 0.245 -- -- -0.169 8.08 31.1 5777 -- --
499.89 1.04 7.82 -2.28 -- -- -- -- -0.414 -- -- -- -- --
361.9 0.89 7.71 -- 2.24 -- -- -- -0.187 8.08 -- -- -- --
607.44 1.15 7.71 -- -- -0.752 -- -- 0.106 -- 31 47520 -- --
636.48 1.18 7.77 -- -- -- -- -- -0.162 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 189.11 atmosphere 1005.0 270 > th dose dependent rect. 3 3
2 190.27 atmosphere 1000.0 10 > th dose independent rect. 7 23
4 190.30 atmosphere 1005.0 270 > th dose dependent rect. 4 1
5 190.44 atmosphere 1000.0 270 > th dose independent rect. 7 20
6 191.12 radiation 40.0 1440 < th dose dependent rect. 12 1
8 191.14 atmosphere 1005.0 270 > th dose dependent rect. 2 5
14 191.81 atmosphere 1005.0 10 > th dose dependent rect. 4 5
16 191.94 temperature 30.0 4320 > th dose independent rect. 11 3
17 191.95 atmosphere 1000.0 10 > th dose independent rect. 9 21
20 192.15 radiation 1.0 1440 > th dose dependent rect. 12 1
25 192.61 temperature 30.0 4320 < th dose independent rect. 11 3
26 192.71 radiation 20.0 1440 > th dose independent rect. 12 1
29 192.99 atmosphere 1000.0 90 > th dose independent rect. 9 19
37 193.33 temperature 30.0 4320 < th dose independent rect. 21 17
40 193.34 temperature 30.0 4320 < th dose independent rect. 18 20
42 193.35 temperature 25.0 1440 > th dose dependent rect. 7 2
43 193.36 temperature 30.0 4320 < th dose independent rect. 4 10
45 193.38 temperature 30.0 4320 < th dose independent rect. 24 14
65 193.42 temperature 30.0 4320 < th dose independent rect. 7 7
106 194.04 radiation 20.0 1440 < th dose independent rect. 12 1
107 194.05 precipitation 0.1 270 < th dose independent rect. 17 14
110 194.05 precipitation 0.1 270 < th dose dependent rect. 17 14
120 194.12 atmosphere 1000.0 270 > th dose independent rect. 5 23
131 194.37 temperature 30.0 4320 < th dose independent sin 5 NA
138 194.51 temperature 30.0 4320 > th dose independent sin 4 NA
154 194.73 temperature 30.0 720 < th dose independent rect. 15 4
162 194.89 temperature 25.0 1440 > th dose dependent rect. 2 7
205 195.08 temperature 30.0 4320 < th dose independent rect. 10 22
219 195.12 temperature 30.0 4320 < th dose independent rect. 10 15
226 195.12 temperature 30.0 4320 < th dose independent rect. 10 20
231 195.13 temperature 30.0 4320 < th dose independent rect. 10 13
236 195.15 temperature 30.0 4320 < th dose independent rect. 10 8
256 195.16 temperature 30.0 720 > th dose independent rect. 16 22
260 195.17 temperature 30.0 4320 > th dose independent no NA NA
347 195.17 temperature 30.0 4320 < th dose independent rect. 4 21
378 195.19 temperature 30.0 4320 < th dose independent rect. 4 19
381 195.19 temperature 30.0 4320 < th dose independent rect. 22 20
392 195.19 temperature 30.0 4320 < th dose independent rect. 24 23
393 195.20 temperature 30.0 4320 < th dose independent no NA NA
403 195.20 temperature 30.0 4320 < th dose independent rect. 4 14
409 195.20 temperature 30.0 4320 < th dose independent rect. 7 18
428 195.21 temperature 30.0 4320 < th dose independent rect. 24 18
462 195.23 temperature 30.0 4320 < th dose independent rect. 7 11
527 195.33 temperature 30.0 720 < th dose independent rect. 15 2
536 195.40 humidity 80.0 270 > th dose independent rect. 19 8
563 195.45 humidity 60.0 270 > th dose dependent rect. 17 10
571 195.50 atmosphere 995.0 270 > th dose independent rect. 7 10
574 195.54 humidity 50.0 270 > th dose dependent rect. 15 12
608 195.91 temperature 20.0 270 > th dose independent rect. 22 4
632 196.18 wind 1.0 270 > th dose independent rect. 17 14
647 196.32 temperature 30.0 270 < th dose independent rect. 7 20
683 196.47 temperature 20.0 30 > th dose independent rect. 22 6
689 196.55 temperature 30.0 720 > th dose independent rect. 10 4
696 196.64 atmosphere 1000.0 270 > th dose independent rect. 21 6
698 196.68 radiation 20.0 1440 < th dose dependent rect. 11 4
724 196.77 temperature 30.0 720 < th dose independent rect. 15 12
725 196.78 humidity 90.0 10 < th dose independent rect. 2 7
745 196.86 humidity 70.0 43200 > th dose dependent rect. 18 5
784 197.17 temperature 10.0 270 > th dose independent rect. 7 10
785 197.17 atmosphere 1015.0 270 < th dose independent rect. 7 10
786 197.17 temperature 10.0 270 > th dose independent rect. 17 14
787 197.17 radiation 30.0 270 < th dose independent rect. 17 14
801 197.26 precipitation 0.1 270 < th dose independent rect. 7 10
802 197.26 precipitation 0.1 270 < th dose dependent rect. 7 10
808 197.29 temperature 25.0 270 > th dose dependent sin 11 NA
809 197.29 temperature 30.0 4320 > th dose dependent rect. 13 1
818 197.39 wind 9.0 270 < th dose independent rect. 17 14
824 197.41 temperature 30.0 4320 < th dose independent sin 11 NA
895 197.87 wind 9.0 270 < th dose independent rect. 7 10
902 197.90 temperature 30.0 720 < th dose independent rect. 16 23
903 197.90 temperature 30.0 720 > th dose dependent rect. 11 4
907 197.91 temperature 30.0 720 < th dose independent rect. 1 23
913 197.93 radiation 10.0 10 < th dose dependent rect. 6 1
915 197.95 humidity 80.0 720 < th dose independent rect. 19 1
929 198.03 temperature 30.0 4320 > th dose independent rect. 16 1
961 198.14 temperature 30.0 720 > th dose dependent rect. 18 22
963 198.16 humidity 50.0 270 > th dose independent rect. 7 10
970 198.18 temperature 30.0 4320 < th dose independent rect. 16 16
979 198.22 temperature 30.0 720 > th dose dependent sin 1 NA
983 198.24 temperature 30.0 4320 < th dose independent rect. 16 1