Os07g0237700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os07g0237700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 149.76 | 0.575 | 6.51 | 2.19 | 2.35 | 2.37 | -0.154 | -1.13 | 0.543 | 20.3 | 27.81 | 11 | -- | -- |
| 151.42 | 0.573 | 6.53 | 2.01 | 2.35 | 2.4 | -0.268 | -- | 0.488 | 20.4 | 27.31 | 11 | -- | -- |
| 149.82 | 0.57 | 6.51 | 2.2 | 2.35 | 2.37 | -- | -1.15 | 0.543 | 20.4 | 27.72 | 11 | -- | -- |
| 151.73 | 0.574 | 6.53 | 2.01 | 2.34 | 2.4 | -- | -- | 0.5 | 20.4 | 27.3 | 11 | -- | -- |
| 445.93 | 0.984 | 6.45 | 2.15 | -- | 3 | -- | -0.198 | 0.555 | -- | 25.1 | 2 | -- | -- |
| 234.53 | 0.718 | 6.65 | 1.42 | 2.51 | -- | -0.133 | -- | -0.0278 | 21.5 | -- | -- | -- | -- |
| 234.6 | 0.717 | 6.65 | 1.43 | 2.51 | -- | -- | -- | -0.0277 | 21.5 | -- | -- | -- | -- |
| 445.84 | 0.988 | 6.45 | 2.12 | -- | 3.02 | -- | -- | 0.551 | -- | 25.1 | 2 | -- | -- |
| 246.55 | 0.735 | 6.61 | -- | 2.36 | 1.61 | -- | -- | 0.122 | 20.8 | 27.11 | 10 | -- | -- |
| 605.89 | 1.15 | 6.58 | 1.44 | -- | -- | -- | -- | -0.0353 | -- | -- | -- | -- | -- |
| 288.18 | 0.794 | 6.69 | -- | 2.52 | -- | -- | -- | -0.187 | 21.5 | -- | -- | -- | -- |
| 555.82 | 1.1 | 6.52 | -- | -- | 2.33 | -- | -- | 0.217 | -- | 25.4 | 4 | -- | -- |
| 660.76 | 1.2 | 6.62 | -- | -- | -- | -- | -- | -0.195 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 152.47 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 2 | 152.51 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 3 | 152.67 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 4 | 152.69 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 5 | 152.99 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 6 | 153.10 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 7 | 153.19 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 8 | 153.40 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 9 | 153.43 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 11 | 153.79 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 13 | 154.02 | wind | 9 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 14 | 154.44 | wind | 5 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 17 | 155.00 | wind | 7 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 18 | 155.01 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 27 | 155.41 | temperature | 25 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 30 | 155.46 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 33 | 155.67 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 6 |
| 36 | 155.74 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 40 | 156.12 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 43 | 156.29 | temperature | 15 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 52 | 156.51 | wind | 7 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 61 | 156.77 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 63 | 156.87 | temperature | 10 | 1440 | > th | dose dependent | rect. | 9 | 9 |
| 72 | 157.03 | wind | 5 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 98 | 157.46 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 110 | 157.71 | wind | 5 | 43200 | > th | dose independent | rect. | 16 | 9 |
| 131 | 157.98 | wind | 5 | 43200 | < th | dose independent | rect. | 16 | 9 |
| 146 | 158.26 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 10 |
| 176 | 158.78 | temperature | 10 | 1440 | > th | dose dependent | sin | 22 | NA |
| 256 | 159.75 | temperature | 15 | 10 | > th | dose dependent | rect. | 4 | 23 |
| 331 | 160.40 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 339 | 160.45 | temperature | 30 | 1440 | < th | dose dependent | rect. | 8 | 11 |
| 406 | 160.87 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 22 |
| 462 | 161.15 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 11 |
| 484 | 161.23 | temperature | 15 | 10 | > th | dose dependent | rect. | 2 | 23 |
| 530 | 161.41 | wind | 5 | 43200 | > th | dose independent | sin | 15 | NA |
| 536 | 161.45 | temperature | 30 | 1440 | < th | dose dependent | sin | 22 | NA |
| 552 | 161.54 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 566 | 161.62 | wind | 5 | 43200 | < th | dose independent | sin | 15 | NA |
| 588 | 161.74 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 22 |
| 673 | 162.13 | temperature | 15 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 807 | 162.65 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 11 |
| 892 | 163.00 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 4 |
| 915 | 163.13 | wind | 3 | 43200 | > th | dose dependent | sin | 15 | NA |
| 941 | 163.26 | wind | 7 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 999 | 163.44 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 21 |