Os07g0232900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter family protein.
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Os07g0232900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 112.2 | 0.498 | 8.14 | 0.445 | 4.01 | 1.83 | -0.692 | -0.706 | 0.574 | 16.2 | 16.73 | 174 | 21.2 | 5.33 |
| 112.5 | 0.494 | 8.14 | 0.464 | 4 | 1.83 | -0.505 | -- | 0.581 | 16.2 | 17.06 | 174 | 21.1 | 5.33 |
| 113.11 | 0.495 | 8.14 | 0.454 | 4 | 1.86 | -- | -0.132 | 0.572 | 16.1 | 17.1 | 175 | 21.1 | 5.37 |
| 113.12 | 0.495 | 8.14 | 0.454 | 4.01 | 1.85 | -- | -- | 0.571 | 16.1 | 17.06 | 175 | 21.1 | 5.38 |
| 257.7 | 0.748 | 7.95 | 1.09 | -- | -3.14 | -- | 4.44 | 0.209 | -- | -10.62 | 576 | 20 | 8.3 |
| 159.52 | 0.592 | 8.13 | 0.581 | 3.49 | -- | -0.905 | -- | 0.653 | 16.8 | -- | -- | -- | -- |
| 161.64 | 0.595 | 8.13 | 0.577 | 3.48 | -- | -- | -- | 0.648 | 16.8 | -- | -- | -- | -- |
| 170.06 | 0.607 | 8.09 | 0.834 | -- | -3.47 | -- | -- | 0.737 | -- | -23.3 | 513 | 19.6 | 10 |
| 118.74 | 0.508 | 8.15 | -- | 4.01 | 1.85 | -- | -- | 0.534 | 16.2 | 17.11 | 175 | 21.1 | 5.43 |
| 802.06 | 1.32 | 8.1 | 0.448 | -- | -- | -- | -- | 0.558 | -- | -- | -- | -- | -- |
| 170.43 | 0.611 | 8.15 | -- | 3.47 | -- | -- | -- | 0.584 | 16.8 | -- | -- | -- | -- |
| 168.92 | 0.605 | 8 | -- | -- | -3.69 | -- | -- | 0.628 | -- | -125.8 | 553 | 19.4 | 9.98 |
| 807.34 | 1.33 | 8.11 | -- | -- | -- | -- | -- | 0.509 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 115.51 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 21 | 4 |
| 2 | 116.53 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 22 | 2 |
| 10 | 119.03 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 19 | 7 |
| 14 | 119.48 | temperature | 20.0 | 270 | > th | dose independent | rect. | 22 | 2 |
| 15 | 119.61 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 4 |
| 21 | 120.38 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 27 | 121.79 | temperature | 20.0 | 90 | > th | dose independent | rect. | 6 | 21 |
| 75 | 124.01 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 16 | 14 |
| 131 | 127.14 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 20 |
| 132 | 127.22 | temperature | 25.0 | 270 | < th | dose independent | rect. | 16 | 14 |
| 185 | 128.86 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 13 |
| 186 | 128.92 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 22 | 5 |
| 190 | 128.98 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 19 |
| 201 | 129.38 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 22 | 2 |
| 211 | 129.63 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 6 | 21 |
| 219 | 129.79 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 20 |
| 257 | 130.99 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 21 |
| 260 | 130.99 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 267 | 131.21 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 22 | 5 |
| 279 | 131.56 | temperature | 15.0 | 270 | > th | dose independent | rect. | 21 | 13 |
| 282 | 131.61 | wind | 3.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 299 | 131.97 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 22 | 2 |
| 311 | 132.25 | temperature | 20.0 | 90 | > th | dose independent | rect. | 22 | 15 |
| 328 | 132.52 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 19 |
| 329 | 132.52 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 19 |
| 335 | 132.69 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 359 | 132.98 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 13 |
| 365 | 133.08 | radiation | 40.0 | 270 | < th | dose independent | rect. | 21 | 13 |
| 386 | 133.31 | temperature | 25.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 389 | 133.38 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 21 |
| 397 | 133.41 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 22 | 5 |
| 409 | 133.55 | wind | 7.0 | 270 | < th | dose independent | rect. | 21 | 13 |
| 422 | 133.71 | radiation | 1.0 | 270 | < th | dose independent | rect. | 2 | 17 |
| 428 | 133.81 | wind | 1.0 | 90 | > th | dose independent | rect. | 22 | 15 |
| 432 | 133.87 | temperature | 20.0 | 10 | > th | dose independent | rect. | 23 | 14 |
| 436 | 133.90 | temperature | 10.0 | 270 | > th | dose independent | rect. | 10 | 11 |
| 438 | 133.90 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 13 |
| 443 | 133.94 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 21 | 14 |
| 447 | 133.98 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 3 |
| 450 | 134.00 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 3 |
| 451 | 134.00 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 13 |
| 452 | 134.00 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 3 |
| 464 | 134.10 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 19 |
| 479 | 134.24 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 513 | 134.44 | wind | 9.0 | 270 | < th | dose independent | rect. | 10 | 11 |
| 552 | 134.80 | wind | 1.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 559 | 134.82 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 5 |
| 560 | 134.82 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 568 | 134.92 | radiation | 1.0 | 270 | < th | dose dependent | sin | 1 | NA |
| 582 | 134.98 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 583 | 134.98 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 3 |
| 586 | 134.98 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 3 |
| 589 | 134.98 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 3 |
| 590 | 134.98 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 592 | 134.98 | radiation | 20.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 599 | 135.00 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 2 | 3 |
| 607 | 135.05 | radiation | 1.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 621 | 135.13 | humidity | 90.0 | 90 | > th | dose independent | rect. | 3 | 20 |
| 622 | 135.14 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 13 |
| 623 | 135.14 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 13 |
| 625 | 135.15 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 3 |
| 629 | 135.17 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 4 |
| 630 | 135.17 | wind | 9.0 | 270 | < th | dose dependent | rect. | 21 | 4 |
| 631 | 135.17 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 4 |
| 642 | 135.24 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 21 |
| 646 | 135.27 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 16 | 14 |
| 655 | 135.32 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 674 | 135.44 | radiation | 20.0 | 270 | < th | dose independent | rect. | 16 | 14 |
| 679 | 135.45 | wind | 3.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 693 | 135.55 | temperature | 20.0 | 10 | > th | dose independent | rect. | 19 | 9 |
| 703 | 135.64 | wind | 7.0 | 90 | < th | dose independent | rect. | 7 | 20 |
| 705 | 135.65 | wind | 7.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 707 | 135.66 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 710 | 135.66 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 713 | 135.66 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 714 | 135.66 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 715 | 135.66 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 752 | 135.78 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 7 |
| 765 | 135.86 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 11 | 11 |
| 766 | 135.86 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 23 | 13 |
| 768 | 135.87 | wind | 5.0 | 270 | < th | dose independent | rect. | 21 | 4 |
| 771 | 135.87 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 3 | 20 |
| 778 | 135.90 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 13 | 8 |
| 780 | 135.91 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 4 |
| 781 | 135.91 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 4 |
| 784 | 135.91 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 4 |
| 785 | 135.91 | radiation | 1.0 | 270 | < th | dose independent | rect. | 21 | 4 |
| 792 | 135.91 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 20 |
| 794 | 135.91 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 21 | 4 |
| 805 | 135.94 | temperature | 25.0 | 720 | > th | dose independent | rect. | 14 | 4 |
| 809 | 135.95 | wind | 9.0 | 270 | < th | dose independent | rect. | 21 | 4 |
| 829 | 136.05 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 835 | 136.08 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 20 |
| 837 | 136.09 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 2 | 3 |
| 887 | 136.26 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 8 | 19 |
| 920 | 136.42 | humidity | 90.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 922 | 136.43 | temperature | 25.0 | 270 | < th | dose independent | sin | 11 | NA |
| 935 | 136.48 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 8 | 19 |
| 954 | 136.50 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 4 | 2 |
| 957 | 136.51 | temperature | 25.0 | 720 | > th | dose independent | rect. | 15 | 2 |
| 961 | 136.51 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 14 | 4 |