Os07g0232300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0232300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.63 | 0.192 | 3.1 | 0.165 | 0.0907 | 0.184 | 0.0347 | 0.9 | -0.0796 | 8.94 | 88 | 5894 | -- | -- |
| 17.76 | 0.196 | 3.1 | 0.13 | 0.0855 | 0.229 | 0.0597 | -- | -0.0974 | 9.36 | 92.47 | 4320 | -- | -- |
| 16.63 | 0.19 | 3.1 | 0.172 | 0.0895 | 0.185 | -- | 0.905 | -0.0796 | 8.85 | 88.97 | 5900 | -- | -- |
| 17.72 | 0.196 | 3.1 | 0.106 | 0.0873 | 0.223 | -- | -- | -0.0989 | 8.68 | 88 | 4330 | -- | -- |
| 17.1 | 0.193 | 3.1 | 0.169 | -- | 0.186 | -- | 0.898 | -0.0793 | -- | 89 | 5889 | -- | -- |
| 18.4 | 0.201 | 3.09 | 0.102 | 0.0892 | -- | 0.0296 | -- | -0.0579 | 8.84 | -- | -- | -- | -- |
| 18.41 | 0.201 | 3.09 | 0.103 | 0.0893 | -- | -- | -- | -0.058 | 8.76 | -- | -- | -- | -- |
| 18.15 | 0.198 | 3.1 | 0.107 | -- | 0.237 | -- | -- | -0.0953 | -- | 87.27 | 4345 | -- | -- |
| 18 | 0.198 | 3.1 | -- | 0.088 | 0.223 | -- | -- | -0.0999 | 8.53 | 85.07 | 4327 | -- | -- |
| 18.86 | 0.203 | 3.09 | 0.103 | -- | -- | -- | -- | -0.0573 | -- | -- | -- | -- | -- |
| 18.69 | 0.202 | 3.09 | -- | 0.0895 | -- | -- | -- | -0.0694 | 8.68 | -- | -- | -- | -- |
| 18.44 | 0.2 | 3.1 | -- | -- | 0.231 | -- | -- | -0.0991 | -- | 85 | 4345 | -- | -- |
| 19.14 | 0.204 | 3.09 | -- | -- | -- | -- | -- | -0.0687 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.36 | humidity | 80 | 14400 | < th | dose dependent | rect. | 5 | 4 |
| 8 | 16.55 | wind | 1 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 9 | 16.56 | humidity | 70 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 13 | 16.63 | humidity | 70 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 17 | 16.65 | humidity | 70 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 30 | 16.66 | humidity | 70 | 14400 | < th | dose independent | rect. | 7 | 3 |
| 53 | 16.67 | humidity | 70 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 57 | 16.68 | humidity | 90 | 4320 | < th | dose dependent | rect. | 23 | 14 |
| 64 | 16.71 | humidity | 70 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 67 | 16.71 | humidity | 50 | 4320 | > th | dose dependent | rect. | 23 | 14 |
| 78 | 16.74 | humidity | 90 | 4320 | < th | dose dependent | sin | 6 | NA |
| 79 | 16.74 | humidity | 50 | 4320 | > th | dose dependent | rect. | 2 | 11 |
| 132 | 16.78 | humidity | 50 | 4320 | > th | dose dependent | sin | 5 | NA |
| 133 | 16.78 | humidity | 60 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 149 | 16.79 | humidity | 50 | 4320 | > th | dose dependent | rect. | 11 | 2 |
| 150 | 16.79 | humidity | 90 | 4320 | < th | dose dependent | rect. | 11 | 2 |
| 192 | 16.81 | humidity | 70 | 4320 | > th | dose independent | sin | 5 | NA |
| 193 | 16.81 | humidity | 70 | 4320 | > th | dose independent | rect. | 8 | 5 |
| 272 | 16.83 | humidity | 70 | 4320 | < th | dose independent | rect. | 8 | 5 |
| 277 | 16.83 | humidity | 70 | 4320 | < th | dose independent | rect. | 8 | 7 |
| 319 | 16.84 | humidity | 70 | 4320 | < th | dose independent | sin | 4 | NA |
| 321 | 16.84 | wind | 1 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 630 | 16.88 | humidity | 50 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 758 | 16.90 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 4 |
| 884 | 16.93 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 885 | 16.93 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 968 | 16.94 | humidity | 80 | 4320 | < th | dose dependent | rect. | 14 | 1 |