Os07g0231800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0231800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 228.46 | 0.71 | 7.5 | 0.806 | 0.784 | -2.09 | 1.31 | 2.96 | 0.437 | 19.5 | 27.7 | 1215 | -- | -- |
| 231.73 | 0.709 | 7.54 | 0.336 | 0.68 | -1.73 | 1.3 | -- | 0.458 | 19.2 | 27.27 | 1234 | -- | -- |
| 233.07 | 0.711 | 7.49 | 0.838 | 0.775 | -2.1 | -- | 3.18 | 0.461 | 19.3 | 27.61 | 1230 | -- | -- |
| 234.51 | 0.713 | 7.56 | 0.163 | 0.771 | -1.76 | -- | -- | 0.347 | 19.3 | 27.76 | 1220 | -- | -- |
| 263.35 | 0.756 | 7.46 | 0.803 | -- | -2.04 | -- | 2.74 | 0.519 | -- | 27.1 | 1285 | -- | -- |
| 363.43 | 0.894 | 7.55 | -0.351 | 0.797 | -- | 1.38 | -- | 0.413 | 18 | -- | -- | -- | -- |
| 368.06 | 0.898 | 7.55 | -0.363 | 0.805 | -- | -- | -- | 0.419 | 17.9 | -- | -- | -- | -- |
| 264.21 | 0.757 | 7.55 | 0.143 | -- | -1.73 | -- | -- | 0.344 | -- | 27.6 | 1276 | -- | -- |
| 234.91 | 0.714 | 7.58 | -- | 0.773 | -1.73 | -- | -- | 0.314 | 19.3 | 27.92 | 1224 | -- | -- |
| 401.68 | 0.936 | 7.54 | -0.388 | -- | -- | -- | -- | 0.4 | -- | -- | -- | -- | -- |
| 371.54 | 0.902 | 7.54 | -- | 0.811 | -- | -- | -- | 0.459 | 17.9 | -- | -- | -- | -- |
| 264.69 | 0.758 | 7.56 | -- | -- | -1.7 | -- | -- | 0.317 | -- | 27.7 | 1274 | -- | -- |
| 405.64 | 0.94 | 7.53 | -- | -- | -- | -- | -- | 0.443 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 242.22 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 2 | 242.46 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 15 |
| 6 | 242.79 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 6 |
| 15 | 243.52 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 39 | 244.63 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 47 | 244.86 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 48 | 244.90 | radiation | 20 | 1440 | > th | dose dependent | rect. | 16 | 16 |
| 49 | 244.94 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 19 |
| 57 | 245.34 | temperature | 25 | 1440 | > th | dose dependent | sin | 18 | NA |
| 91 | 245.79 | temperature | 30 | 1440 | > th | dose dependent | sin | 15 | NA |
| 95 | 245.86 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 131 | 246.03 | humidity | 80 | 720 | < th | dose dependent | rect. | 18 | 3 |
| 167 | 246.44 | humidity | 80 | 720 | < th | dose dependent | rect. | 17 | 15 |
| 245 | 247.08 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 17 |
| 333 | 247.56 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 483 | 248.14 | temperature | 30 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 566 | 248.86 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 5 |
| 583 | 248.91 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 13 |
| 585 | 248.92 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 17 |
| 592 | 248.95 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 20 |
| 593 | 248.96 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 7 |
| 610 | 249.14 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 9 |
| 614 | 249.24 | temperature | 30 | 1440 | > th | dose independent | sin | 13 | NA |
| 633 | 249.50 | temperature | 30 | 1440 | < th | dose independent | sin | 13 | NA |
| 643 | 249.64 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 16 |
| 645 | 249.67 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 20 |
| 718 | 250.25 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 8 |
| 735 | 250.53 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 2 |
| 754 | 250.76 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 9 |
| 775 | 251.01 | radiation | 10 | 1440 | > th | dose dependent | rect. | 17 | 14 |
| 795 | 251.31 | humidity | 70 | 720 | > th | dose independent | sin | 12 | NA |
| 798 | 251.32 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 19 |
| 799 | 251.33 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 17 |
| 802 | 251.33 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 22 |
| 807 | 251.35 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 11 |
| 826 | 251.49 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 22 |
| 851 | 251.69 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 16 |
| 886 | 251.98 | radiation | 20 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 904 | 252.13 | radiation | 30 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 919 | 252.15 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 964 | 252.36 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 21 |
| 965 | 252.36 | temperature | 30 | 1440 | < th | dose independent | rect. | 23 | 21 |
| 979 | 252.37 | temperature | 30 | 1440 | < th | dose independent | rect. | 24 | 19 |
| 988 | 252.38 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |