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Os07g0230400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.88 (0.0221) R2 : 0.332
β1 : 1.16 (0.0811) R2dD : 0.311 R2D : 0.227
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.347 (0.0473) R2dN8 : 0.105 R2N8 : 0.021
σ : 0.416
deviance : 79.17
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
63.43 0.374 7.91 0.459 0.244 -1.15 -0.514 -0.552 0.0844 2.89 22.21 11360 -- --
63.57 0.371 7.93 0.463 0.244 -0.958 -0.525 -- 0.0855 2.94 22.07 11384 -- --
64.07 0.373 7.9 0.444 0.25 -1.28 -- -0.789 0.111 2.1 21.31 11357 -- --
64.29 0.373 7.93 0.474 0.244 -0.962 -- -- 0.0919 2.11 21.97 11365 -- --
67.56 0.383 7.89 0.44 -- -1.45 -- -1.16 0.109 -- 21.21 11261 -- --
74.3 0.404 7.88 1.14 0.264 -- -0.521 -- 0.337 2.92 -- -- -- --
75.05 0.406 7.88 1.15 0.262 -- -- -- 0.34 2.13 -- -- -- --
67.85 0.384 7.93 0.477 -- -0.979 -- -- 0.0898 -- 22.28 11276 -- --
67.42 0.382 7.96 -- 0.247 -1.09 -- -- -0.0272 2.2 20.89 47520 -- --
79.17 0.416 7.88 1.16 -- -- -- -- 0.347 -- -- -- -- --
109.9 0.49 7.91 -- 0.284 -- -- -- 0.212 2.22 -- -- -- --
71.07 0.393 7.96 -- -- -1.1 -- -- -0.0288 -- 21.09 47520 -- --
114.72 0.5 7.9 -- -- -- -- -- 0.218 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 61.50 wind 7 14400 > th dose dependent rect. 3 8
4 61.92 wind 9 14400 > th dose independent rect. 23 12
5 61.92 wind 7 14400 > th dose dependent rect. 23 12
9 62.08 wind 7 14400 > th dose independent rect. 3 8
10 62.11 wind 9 14400 < th dose independent rect. 23 12
13 62.21 wind 7 14400 < th dose independent rect. 3 8
14 62.21 humidity 90 14400 > th dose dependent rect. 5 12
34 62.46 wind 5 14400 > th dose dependent rect. 9 2
41 62.54 wind 5 14400 > th dose independent rect. 9 2
42 62.54 humidity 90 14400 > th dose independent rect. 1 17
53 62.59 wind 9 14400 < th dose independent rect. 1 7
57 62.60 humidity 90 14400 > th dose dependent sin 1 NA
58 62.60 humidity 70 43200 > th dose dependent rect. 21 1
69 62.67 wind 5 14400 < th dose independent rect. 9 2
71 62.67 humidity 70 43200 > th dose dependent rect. 19 4
73 62.67 wind 1 43200 < th dose dependent rect. 5 21
79 62.70 wind 5 14400 > th dose independent rect. 8 4
87 62.73 wind 5 14400 < th dose independent rect. 8 4
102 62.77 humidity 90 14400 < th dose independent rect. 24 18
105 62.78 humidity 90 14400 > th dose independent rect. 4 12
110 62.78 wind 5 14400 > th dose dependent rect. 7 5
112 62.79 humidity 90 14400 > th dose independent sin 2 NA
114 62.79 humidity 90 14400 < th dose independent rect. 1 16
121 62.80 humidity 80 43200 < th dose independent rect. 15 15
151 62.87 humidity 80 43200 > th dose independent rect. 16 11
162 62.89 humidity 90 14400 > th dose independent rect. 6 1
187 62.92 humidity 90 14400 < th dose independent rect. 11 1
229 62.97 temperature 20 14400 < th dose dependent rect. 20 1
234 62.98 humidity 80 43200 < th dose independent sin 15 NA
235 62.98 humidity 90 14400 < th dose independent rect. 15 1
244 62.99 radiation 10 4320 > th dose dependent rect. 17 13
250 63.00 humidity 90 14400 > th dose dependent rect. 6 1
268 63.03 humidity 90 14400 < th dose independent sin 3 NA
275 63.04 wind 9 14400 < th dose independent rect. 2 3
294 63.06 humidity 90 14400 < th dose independent rect. 10 7
305 63.08 humidity 80 43200 > th dose independent sin 15 NA
325 63.10 wind 9 14400 < th dose dependent rect. 3 10
335 63.12 humidity 80 43200 < th dose independent rect. 2 1
355 63.14 humidity 90 14400 < th dose independent rect. 5 12
398 63.21 wind 3 14400 < th dose dependent rect. 3 1
399 63.21 wind 3 14400 > th dose dependent rect. 4 2
417 63.23 humidity 70 43200 < th dose dependent rect. 1 7
470 63.30 wind 3 43200 > th dose independent rect. 6 1
471 63.30 wind 3 43200 < th dose independent rect. 6 1
472 63.30 humidity 80 43200 > th dose independent rect. 2 1
473 63.30 humidity 80 43200 < th dose independent rect. 2 4
486 63.31 wind 5 14400 < th dose independent rect. 4 2
504 63.33 wind 9 14400 < th dose independent rect. 4 1
516 63.34 humidity 90 14400 > th dose independent rect. 10 8
524 63.34 humidity 70 43200 > th dose dependent rect. 4 3
528 63.35 humidity 80 43200 < th dose independent rect. 4 1
540 63.36 wind 1 43200 > th dose independent rect. 14 1
541 63.36 radiation 10 14400 > th dose independent rect. 5 1
566 63.37 humidity 70 43200 > th dose independent rect. 1 6
567 63.37 temperature 20 14400 < th dose independent rect. 10 11
589 63.39 wind 3 43200 < th dose dependent rect. 6 4
600 63.40 humidity 70 43200 > th dose dependent rect. 18 14
601 63.40 humidity 60 43200 > th dose dependent rect. 16 15
639 63.43 temperature 20 14400 < th dose dependent rect. 7 1
654 63.44 wind 3 43200 < th dose dependent rect. 6 1
683 63.46 wind 1 43200 < th dose dependent rect. 7 23
690 63.47 humidity 80 43200 > th dose independent rect. 16 19
730 63.50 temperature 25 14400 < th dose dependent rect. 16 1
756 63.52 humidity 90 14400 > th dose independent rect. 15 1
759 63.52 temperature 20 90 > th dose independent rect. 22 8
777 63.53 temperature 20 14400 < th dose independent rect. 15 6
794 63.54 temperature 20 14400 > th dose independent rect. 10 11
802 63.54 temperature 20 14400 < th dose dependent rect. 6 18
817 63.55 wind 5 43200 < th dose dependent rect. 9 1
826 63.56 wind 7 14400 < th dose independent sin 7 NA
827 63.56 humidity 90 14400 > th dose independent rect. 14 3
857 63.58 wind 7 14400 > th dose independent rect. 3 3
871 63.58 humidity 60 43200 > th dose dependent rect. 17 10
877 63.58 wind 1 43200 < th dose dependent rect. 9 21
890 63.59 wind 5 14400 > th dose dependent sin 6 NA
899 63.60 wind 7 14400 > th dose independent sin 7 NA
914 63.60 humidity 60 43200 > th dose dependent sin 13 NA
930 63.61 temperature 20 14400 < th dose independent rect. 19 2
935 63.61 wind 1 43200 < th dose independent rect. 8 22
938 63.61 radiation 10 14400 > th dose dependent rect. 5 1
945 63.61 temperature 20 14400 < th dose dependent rect. 6 5
964 63.62 wind 7 43200 > th dose independent rect. 18 1
992 63.63 temperature 20 14400 < th dose independent sin 21 NA
999 63.63 wind 7 14400 > th dose independent rect. 23 7