Os07g0228900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0228900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 173.84 | 0.619 | 5.53 | 2.15 | 1.71 | -1.92 | 0.855 | -5.14 | 0.688 | 17.2 | 20.1 | 6783 | -- | -- |
| 206.45 | 0.674 | 5.71 | 2.03 | 1.65 | -0.362 | 0.814 | -- | 0.708 | 17.5 | 20.1 | 6783 | -- | -- |
| 175.64 | 0.617 | 5.53 | 2.15 | 1.71 | -1.93 | -- | -5.12 | 0.688 | 17.2 | 20.08 | 6604 | -- | -- |
| 200.71 | 0.66 | 5.78 | 1.68 | 1.71 | -0.762 | -- | -- | 0.464 | 17.3 | 21.72 | 7201 | -- | -- |
| 326.9 | 0.842 | 5.51 | 2.14 | -- | -1.86 | -- | -5.05 | 0.66 | -- | 20 | 6326 | -- | -- |
| 211.77 | 0.682 | 5.7 | 2.13 | 1.69 | -- | 0.889 | -- | 0.775 | 17.3 | -- | -- | -- | -- |
| 213.73 | 0.685 | 5.7 | 2.13 | 1.7 | -- | -- | -- | 0.779 | 17.3 | -- | -- | -- | -- |
| 348.7 | 0.874 | 5.7 | 1.92 | -- | -0.591 | -- | -- | 0.63 | -- | 20 | 6326 | -- | -- |
| 203.61 | 0.665 | 5.88 | -- | 1.71 | -1.68 | -- | -- | -0.0239 | 17.2 | 21.5 | 47520 | -- | -- |
| 364.11 | 0.892 | 5.67 | 2.07 | -- | -- | -- | -- | 0.737 | -- | -- | -- | -- | -- |
| 332.99 | 0.854 | 5.75 | -- | 1.66 | -- | -- | -- | 0.542 | 17.3 | -- | -- | -- | -- |
| 357.41 | 0.881 | 5.85 | -- | -- | -1.62 | -- | -- | -0.0292 | -- | 21.14 | 47520 | -- | -- |
| 476.97 | 1.02 | 5.73 | -- | -- | -- | -- | -- | 0.507 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 168.36 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 6 |
| 3 | 168.90 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 6 |
| 8 | 170.61 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 12 | 171.84 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 21 | 13 |
| 17 | 172.40 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 2 | 3 |
| 19 | 172.75 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 35 | 173.83 | temperature | 30.0 | 90 | < th | dose dependent | sin | 6 | NA |
| 39 | 174.27 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 3 | 5 |
| 45 | 174.52 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 1 | 20 |
| 51 | 174.76 | temperature | 20.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 56 | 174.89 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 3 | 1 |
| 63 | 175.16 | temperature | 25.0 | 90 | < th | dose dependent | sin | 4 | NA |
| 74 | 175.55 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 135 | 176.87 | temperature | 20.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 139 | 176.94 | temperature | 30.0 | 270 | < th | dose dependent | sin | 8 | NA |
| 152 | 177.07 | temperature | 20.0 | 10 | < th | dose independent | rect. | 2 | 7 |
| 154 | 177.12 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 165 | 177.27 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 2 | 20 |
| 178 | 177.38 | wind | 7.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 188 | 177.52 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 200 | 177.61 | temperature | 20.0 | 30 | < th | dose dependent | sin | 0 | NA |
| 205 | 177.70 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 2 | 2 |
| 208 | 177.72 | temperature | 10.0 | 90 | > th | dose dependent | sin | 8 | NA |
| 217 | 177.77 | temperature | 20.0 | 90 | < th | dose independent | sin | 2 | NA |
| 249 | 178.06 | temperature | 20.0 | 10 | < th | dose independent | sin | 1 | NA |
| 272 | 178.29 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 278 | 178.34 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 20 |
| 286 | 178.39 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 21 | 6 |
| 289 | 178.41 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 291 | 178.44 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 302 | 178.51 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 21 | 2 |
| 320 | 178.60 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 326 | 178.62 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 2 |
| 347 | 178.75 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 348 | 178.75 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 21 | 2 |
| 363 | 178.88 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 9 | 3 |
| 365 | 178.89 | wind | 7.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 370 | 178.91 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 20 | 8 |
| 396 | 179.07 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 8 |
| 397 | 179.07 | temperature | 20.0 | 270 | > th | dose independent | rect. | 20 | 14 |
| 411 | 179.14 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 425 | 179.21 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 447 | 179.32 | wind | 5.0 | 4320 | > th | dose independent | sin | 11 | NA |
| 468 | 179.38 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 537 | 179.63 | temperature | 20.0 | 4320 | < th | dose independent | sin | 15 | NA |
| 557 | 179.68 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 567 | 179.71 | temperature | 20.0 | 270 | < th | dose independent | rect. | 3 | 1 |
| 600 | 179.81 | temperature | 20.0 | 4320 | > th | dose independent | sin | 14 | NA |
| 611 | 179.83 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 21 | 7 |
| 760 | 180.21 | wind | 5.0 | 4320 | < th | dose independent | sin | 11 | NA |
| 797 | 180.31 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 857 | 180.44 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 879 | 180.50 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 3 |