Os07g0226200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0226200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72.63 | 0.4 | 12.6 | -0.588 | 1.98 | -1.19 | -0.679 | -1.41 | -0.208 | 21.1 | 27.45 | 238 | -- | -- |
| 75.19 | 0.404 | 12.6 | -0.823 | 1.97 | -1.16 | -0.75 | -- | -0.258 | 21.2 | 28.3 | 244 | -- | -- |
| 74.07 | 0.401 | 12.6 | -0.547 | 2.03 | -1.19 | -- | -1.48 | -0.207 | 21.1 | 27.61 | 179 | -- | -- |
| 76.93 | 0.409 | 12.6 | -0.808 | 1.96 | -1.17 | -- | -- | -0.269 | 21.1 | 28.14 | 243 | -- | -- |
| 234.68 | 0.713 | 12.6 | -0.95 | -- | -2.56 | -- | -1.03 | -0.385 | -- | 53.01 | 619 | -- | -- |
| 93.9 | 0.454 | 12.6 | -0.535 | 2.09 | -- | -0.664 | -- | -0.0169 | 20.6 | -- | -- | -- | -- |
| 95.32 | 0.457 | 12.6 | -0.514 | 2.09 | -- | -- | -- | -0.0168 | 20.5 | -- | -- | -- | -- |
| 233.87 | 0.712 | 12.6 | -1.15 | -- | -2.63 | -- | -- | -0.426 | -- | 78.42 | 624 | -- | -- |
| 92.34 | 0.448 | 12.6 | -- | 2.01 | -0.793 | -- | -- | -0.109 | 20.9 | 28 | 250 | -- | -- |
| 340.66 | 0.862 | 12.5 | -0.522 | -- | -- | -- | -- | -0.0363 | -- | -- | -- | -- | -- |
| 102.28 | 0.473 | 12.6 | -- | 2.09 | -- | -- | -- | 0.0405 | 20.5 | -- | -- | -- | -- |
| 265.43 | 0.759 | 12.6 | -- | -- | -2.21 | -- | -- | -0.246 | -- | 62.37 | 610 | -- | -- |
| 347.85 | 0.871 | 12.5 | -- | -- | -- | -- | -- | 0.0216 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 72.15 | temperature | 10 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 5 | 73.10 | temperature | 25 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 6 | 73.14 | temperature | 25 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 17 | 73.59 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 19 | 73.63 | temperature | 25 | 270 | < th | dose dependent | rect. | 13 | 23 |
| 27 | 73.77 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 17 |
| 134 | 74.86 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 9 |
| 162 | 75.09 | temperature | 25 | 720 | < th | dose dependent | sin | 22 | NA |
| 167 | 75.10 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 18 |
| 182 | 75.20 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 9 |
| 215 | 75.39 | temperature | 15 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 294 | 75.85 | temperature | 20 | 270 | > th | dose dependent | rect. | 21 | 13 |
| 313 | 75.93 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 23 |
| 314 | 75.94 | temperature | 20 | 1440 | > th | dose independent | sin | 11 | NA |
| 332 | 76.00 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 440 | 76.31 | temperature | 20 | 1440 | < th | dose independent | sin | 11 | NA |
| 477 | 76.41 | temperature | 30 | 270 | < th | dose dependent | sin | 8 | NA |
| 514 | 76.49 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 3 |
| 557 | 76.60 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 13 |
| 593 | 76.69 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 693 | 76.86 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 780 | 76.98 | temperature | 15 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 804 | 77.02 | temperature | 20 | 270 | > th | dose dependent | sin | 8 | NA |
| 848 | 77.10 | temperature | 25 | 1440 | < th | dose dependent | sin | 13 | NA |
| 965 | 77.24 | temperature | 15 | 90 | > th | dose dependent | no | NA | NA |