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Os07g0222900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.31 (0.0393) R2 : 0.801
β1 : -- (--) R2dD : -- R2D : --
β2 : 4.54 (0.11) R2dC : 1 R2C : 0.365
β3 : 3.17 (0.123) R2dE : 0.389 R2E : -0.255
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.699 (0.0826) R2dN8 : 0.0415 R2N8 : 0.0331
σ : 0.737
deviance : 250.37
__
_____
C
peak time of C : 22.2
E
wheather : temperature
threshold : 4.256
memory length : 248
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 7.92
open length of G : 8.35

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
245.64 0.736 7.32 -0.262 4.36 3.03 -0.669 0.852 -0.766 22 9.206 247 8.04 8.2
245.5 0.73 7.31 -0.233 4.38 3.03 -1.08 -- -0.753 22.1 5.377 247 8.03 8.32
246.39 0.731 7.32 -0.198 4.4 2.94 -- 1.34 -0.753 22 8.428 234 8.03 8.28
249.4 0.736 7.32 -0.238 4.45 3.05 -- -- -0.756 22.1 5.286 244 8 8.28
300.52 0.807 7.13 0.269 -- 4.46 -- 0.365 -0.605 -- -7.743 877 9.08 7.3
324.74 0.845 7.31 -0.0294 4.03 -- -1.24 -- -0.727 19.9 -- -- -- --
329.21 0.85 7.31 0.00421 4.03 -- -- -- -0.728 19.9 -- -- -- --
270.13 0.765 7.2 0.0473 -- 4.15 -- -- -0.634 -- -88.98 928 9.02 6.7
250.37 0.737 7.31 -- 4.54 3.17 -- -- -0.699 22.2 4.256 248 7.92 8.35
1211.77 1.63 7.21 -0.04 -- -- -- -- -0.782 -- -- -- -- --
329.22 0.849 7.31 -- 4.03 -- -- -- -0.729 19.9 -- -- -- --
266.13 0.76 7.18 -- -- 4.29 -- -- -0.664 -- -65.38 947 8.83 6.55
1211.82 1.62 7.21 -- -- -- -- -- -0.778 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 247.46 temperature 10.0 270 > th dose dependent rect. 8 8
5 251.12 wind 7.0 270 < th dose independent rect. 9 18
7 251.27 wind 9.0 270 < th dose dependent rect. 9 18
14 253.41 temperature 10.0 90 > th dose dependent rect. 9 19
16 254.30 temperature 20.0 10 > th dose dependent rect. 9 9
31 257.17 wind 7.0 270 < th dose independent rect. 8 8
42 257.87 temperature 10.0 10 > th dose dependent rect. 10 19
49 258.59 wind 5.0 270 < th dose independent rect. 21 6
53 258.85 wind 7.0 270 < th dose independent rect. 20 8
57 259.20 radiation 40.0 270 < th dose dependent rect. 3 7
74 260.26 radiation 20.0 270 < th dose independent rect. 3 6
83 260.81 wind 7.0 270 < th dose independent rect. 22 16
85 260.87 temperature 30.0 90 < th dose independent rect. 4 19
87 260.89 wind 9.0 270 < th dose dependent rect. 8 8
89 261.14 wind 9.0 270 < th dose dependent rect. 21 6
90 261.28 atmosphere 995.0 270 > th dose independent rect. 16 16
97 261.62 temperature 25.0 270 > th dose independent rect. 8 7
99 261.69 temperature 10.0 270 > th dose dependent rect. 22 16
100 261.83 atmosphere 995.0 270 > th dose independent rect. 4 16
101 261.87 radiation 20.0 270 < th dose independent rect. 16 16
102 261.97 atmosphere 995.0 270 > th dose independent rect. 3 18
104 262.03 temperature 30.0 270 < th dose independent rect. 3 6
105 262.23 atmosphere 1015.0 270 < th dose independent rect. 4 17
111 262.41 radiation 40.0 270 < th dose dependent rect. 3 18
117 262.51 precipitation 0.1 270 < th dose independent rect. 21 7
118 262.51 precipitation 0.1 270 < th dose dependent rect. 21 7
119 262.54 radiation 40.0 270 < th dose dependent rect. 16 16
131 262.91 radiation 1.0 270 < th dose dependent rect. 21 7
133 262.92 temperature 10.0 270 > th dose independent rect. 21 7
134 262.92 temperature 30.0 270 < th dose independent rect. 21 7
135 262.92 humidity 50.0 270 > th dose independent rect. 21 7
138 262.92 atmosphere 995.0 270 > th dose independent rect. 21 7
139 262.92 radiation 1.0 270 < th dose independent rect. 21 7
155 262.92 temperature 10.0 270 > th dose independent rect. 4 16
191 263.20 precipitation 0.1 270 < th dose independent rect. 9 18
192 263.20 precipitation 0.1 270 < th dose dependent rect. 9 18
199 263.49 precipitation 0.1 270 < th dose independent rect. 8 8
200 263.49 precipitation 0.1 270 < th dose dependent rect. 8 8
212 263.81 temperature 10.0 270 > th dose independent rect. 8 8
213 263.81 atmosphere 1015.0 270 < th dose independent rect. 8 8
214 263.81 temperature 10.0 270 > th dose independent rect. 16 16
216 263.86 humidity 60.0 270 > th dose independent rect. 3 6
217 263.91 wind 7.0 270 < th dose independent rect. 6 23
226 264.20 radiation 40.0 270 < th dose independent rect. 16 16
229 264.31 wind 9.0 270 < th dose independent rect. 3 6
230 264.31 temperature 10.0 270 > th dose independent rect. 3 6
233 264.31 atmosphere 995.0 270 > th dose independent rect. 3 6
234 264.31 atmosphere 1015.0 270 < th dose independent rect. 3 6
235 264.31 temperature 10.0 270 > th dose independent rect. 9 18
239 264.39 humidity 50.0 270 > th dose dependent rect. 3 6
240 264.41 atmosphere 1000.0 10 > th dose independent rect. 5 18
242 264.63 radiation 40.0 90 < th dose dependent rect. 5 18
288 265.46 precipitation 0.1 270 < th dose independent rect. 3 6
289 265.46 precipitation 0.1 270 < th dose dependent rect. 3 6
292 265.52 wind 9.0 270 < th dose independent rect. 16 16
300 265.62 radiation 1.0 270 > th dose independent rect. 8 8
303 265.66 humidity 50.0 270 > th dose independent rect. 17 15
308 265.83 radiation 40.0 270 < th dose dependent rect. 15 18
320 266.03 precipitation 0.1 270 < th dose independent rect. 4 16
321 266.03 precipitation 0.1 270 < th dose dependent rect. 4 16
322 266.05 radiation 40.0 270 < th dose independent rect. 3 19
324 266.07 radiation 40.0 270 < th dose independent rect. 1 22
349 266.55 radiation 40.0 270 < th dose independent rect. 13 9
369 266.89 wind 1.0 90 > th dose independent rect. 23 6
381 266.98 radiation 20.0 270 < th dose independent rect. 3 18
394 267.21 precipitation 0.1 90 < th dose independent rect. 23 6
395 267.21 precipitation 0.1 90 < th dose dependent rect. 23 6
413 267.33 temperature 10.0 90 > th dose independent rect. 23 6
414 267.33 temperature 30.0 90 < th dose independent rect. 23 6
415 267.33 humidity 50.0 90 > th dose independent rect. 23 6
418 267.33 atmosphere 995.0 90 > th dose independent rect. 23 6
419 267.33 radiation 20.0 90 < th dose independent rect. 23 6
447 267.42 radiation 20.0 270 < th dose independent rect. 4 4
451 267.43 atmosphere 995.0 10 > th dose dependent rect. 5 18
482 267.81 temperature 25.0 270 > th dose dependent rect. 22 16
503 268.07 radiation 10.0 10 < th dose dependent rect. 23 8
522 268.32 temperature 30.0 90 < th dose dependent rect. 5 17
524 268.37 precipitation 0.1 270 < th dose independent rect. 16 16
525 268.37 wind 7.0 10 < th dose independent rect. 10 19
526 268.37 precipitation 0.1 270 < th dose dependent rect. 16 16
540 268.62 precipitation 0.1 270 < th dose independent rect. 22 16
541 268.62 precipitation 0.1 270 < th dose dependent rect. 22 16
543 268.63 radiation 30.0 90 < th dose independent rect. 5 18
546 268.67 atmosphere 995.0 270 > th dose independent rect. 8 8
562 268.83 atmosphere 995.0 270 > th dose independent rect. 14 8
576 268.88 wind 9.0 270 < th dose independent rect. 3 18
588 268.98 wind 9.0 270 < th dose independent rect. 4 16
620 269.30 radiation 10.0 10 < th dose dependent sin 9 NA
627 269.39 wind 9.0 10 < th dose dependent rect. 23 6
629 269.41 temperature 30.0 10 < th dose independent rect. 5 5
639 269.50 temperature 30.0 10 < th dose dependent rect. 5 18
643 269.54 temperature 15.0 270 > th dose independent rect. 14 8
654 269.62 temperature 10.0 270 > th dose independent rect. 22 16
655 269.62 atmosphere 995.0 270 > th dose independent rect. 22 16
676 269.84 temperature 10.0 10 > th dose independent rect. 23 6
677 269.84 temperature 30.0 10 < th dose independent rect. 23 6
678 269.84 humidity 50.0 10 > th dose independent rect. 23 6
681 269.84 atmosphere 995.0 10 > th dose independent rect. 23 6
682 269.84 radiation 1.0 10 < th dose independent rect. 23 6
687 269.84 temperature 10.0 10 > th dose independent rect. 5 18
689 269.84 atmosphere 1015.0 10 < th dose independent rect. 5 18
691 269.84 radiation 40.0 10 < th dose dependent rect. 23 6
725 270.04 wind 9.0 270 < th dose dependent rect. 4 3
732 270.08 precipitation 0.1 10 < th dose independent rect. 23 6
733 270.08 precipitation 0.1 10 < th dose dependent rect. 23 6
735 270.11 humidity 50.0 270 > th dose dependent rect. 4 4
760 270.25 wind 1.0 270 > th dose independent rect. 8 8
761 270.26 atmosphere 995.0 270 > th dose dependent rect. 22 5
767 270.30 temperature 25.0 270 > th dose independent rect. 23 16
805 270.46 radiation 1.0 10 < th dose independent rect. 23 8
844 270.69 atmosphere 1015.0 270 < th dose dependent rect. 9 6
849 270.72 humidity 60.0 10 > th dose independent rect. 5 18
850 270.72 atmosphere 1015.0 90 < th dose dependent rect. 9 8
860 270.77 humidity 50.0 90 > th dose independent rect. 5 18
884 270.84 precipitation 0.1 10 < th dose independent rect. 5 18
885 270.84 precipitation 0.1 10 < th dose dependent rect. 5 18
920 271.04 wind 1.0 270 > th dose independent rect. 14 9
961 271.19 atmosphere 1015.0 270 < th dose independent rect. 14 8
977 271.28 temperature 20.0 10 > th dose independent rect. 5 5
1000 271.47 humidity 50.0 270 > th dose independent rect. 4 16