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Os07g0220200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.92 (0.0769) R2 : 0.449
β1 : 3.23 (0.283) R2dD : 0.171 R2D : 0.0923
β2 : 1.36 (0.182) R2dC : 0.0674 R2C : 0.0556
β3 : 2.38 (0.478) R2dE : 0.075 R2E : -0.229
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 23.2 (2.16) R2dD*E : 0.34 R2D*E : 0.107
γ1 : 1.43 (0.166) R2dN8 : 0.129 R2N8 : 0.0674
σ : 1.41
deviance : 916.43
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C
peak time of C : 1.75
E
wheather : wind
threshold : 7.026
memory length : 4596
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 19
open length of G : 0.995

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
913.76 1.42 7.93 3.2 1.36 2.39 -0.853 23.5 1.43 1.65 6.989 4595 19 0.983
1041.18 1.5 7.69 3.88 1.16 3.66 0.0656 -- 1.53 2.25 -8.513 47520 15 3.17
916.43 1.41 7.92 3.23 1.36 2.38 -- 23.2 1.43 1.75 7.026 4596 19 0.995
1017.58 1.49 7.73 4.68 1.23 4.76 -- -- 1.57 1.54 0.3933 47520 15.2 3.53
1026.43 1.49 7.91 3.28 -- 2.32 -- 22.5 1.45 -- 7.1 4701 19 1
1194.9 1.62 7.74 3.02 1.24 -- -0.283 -- 1.56 1.52 -- -- -- --
1195.21 1.62 7.74 3.03 1.24 -- -- -- 1.57 1.56 -- -- -- --
1110.81 1.55 7.72 4.74 -- 4.99 -- -- 1.64 -- 0.3 47520 15.2 3.6
1354.63 1.71 7.94 -- 1.25 -2.29 -- -- 0.805 1.49 -8.009 47520 18.8 5.23
1289.18 1.68 7.73 3.08 -- -- -- -- 1.59 -- -- -- -- --
1436.47 1.77 7.82 -- 1.29 -- -- -- 1.23 1.64 -- -- -- --
1272.46 1.66 7.83 -- -- -2.11 -- -- 1 -- -12.13 47520 22.2 0.0167
1538.64 1.83 7.8 -- -- -- -- -- 1.25 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 908.45 atmosphere 1000 14400 > th dose independent rect. 23 1
2 908.61 atmosphere 1000 14400 < th dose independent rect. 22 1
34 922.50 wind 7 4320 > th dose dependent rect. 19 1
64 928.36 wind 7 4320 < th dose independent rect. 19 2
78 930.22 wind 7 4320 > th dose independent rect. 19 2
157 938.31 atmosphere 1000 14400 > th dose independent sin 14 NA
162 938.73 atmosphere 1000 14400 < th dose independent sin 14 NA
197 940.87 wind 7 4320 > th dose dependent rect. 18 9
201 941.23 wind 7 4320 < th dose independent rect. 18 5
207 941.73 wind 7 4320 < th dose independent rect. 18 9
208 941.74 wind 7 4320 > th dose dependent rect. 18 5
282 945.51 wind 7 4320 > th dose independent rect. 18 9
287 945.70 wind 7 4320 > th dose independent rect. 18 5
306 946.82 atmosphere 1015 14400 < th dose dependent rect. 5 1
337 948.05 atmosphere 995 14400 > th dose dependent rect. 5 1
396 949.13 atmosphere 995 14400 > th dose dependent rect. 23 9
453 949.60 atmosphere 1000 14400 < th dose independent rect. 15 3
486 949.99 atmosphere 995 14400 > th dose dependent rect. 22 13
510 950.25 atmosphere 1015 14400 < th dose dependent sin 7 NA
563 950.75 atmosphere 1015 14400 < th dose dependent rect. 10 1
566 950.77 atmosphere 995 14400 > th dose dependent rect. 7 1
570 950.81 atmosphere 995 14400 > th dose dependent sin 8 NA
634 951.39 atmosphere 1005 14400 < th dose dependent rect. 22 1
640 951.45 atmosphere 1005 14400 < th dose dependent rect. 22 3
679 951.73 atmosphere 995 14400 > th dose dependent rect. 10 1
727 952.16 atmosphere 1005 14400 < th dose dependent rect. 22 7