Os07g0217800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0217800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20.47 | 0.213 | 3.41 | 0.799 | 0.00654 | -29.4 | -0.107 | -61.3 | 0.113 | 18.5 | 15 | 773 | -- | -- |
| 21.4 | 0.217 | 3.03 | -0.0514 | 0.00957 | 0.0724 | 0.107 | -- | 0.104 | 9.21 | 15 | 773 | -- | -- |
| 20.48 | 0.211 | 3.41 | 0.8 | 0.0197 | -29.3 | -- | -61.2 | 0.113 | 13.8 | 15.01 | 773 | -- | -- |
| 21.21 | 0.215 | 3.02 | -0.0178 | 0.0047 | -0.174 | -- | -- | 0.115 | 9.31 | 17.48 | 1043 | -- | -- |
| 20.5 | 0.211 | 3.41 | 0.799 | -- | -29.3 | -- | -61.2 | 0.112 | -- | 15.01 | 773 | -- | -- |
| 21.4 | 0.217 | 3.03 | -0.0483 | 0.0125 | -- | 0.0931 | -- | 0.104 | 9.62 | -- | -- | -- | -- |
| 21.42 | 0.217 | 3.03 | -0.044 | 0.0217 | -- | -- | -- | 0.105 | 13.7 | -- | -- | -- | -- |
| 21.21 | 0.215 | 3.02 | -0.0182 | -- | -0.174 | -- | -- | 0.116 | -- | 17.48 | 1043 | -- | -- |
| 21.22 | 0.215 | 3.02 | -- | 0.00312 | -0.188 | -- | -- | 0.118 | 9.57 | 17.2 | 1028 | -- | -- |
| 21.45 | 0.216 | 3.03 | -0.0449 | -- | -- | -- | -- | 0.104 | -- | -- | -- | -- | -- |
| 21.47 | 0.217 | 3.02 | -- | 0.0225 | -- | -- | -- | 0.11 | 13.8 | -- | -- | -- | -- |
| 21.21 | 0.214 | 3.02 | -- | -- | -0.207 | -- | -- | 0.117 | -- | 17 | 1010 | -- | -- |
| 21.5 | 0.216 | 3.02 | -- | -- | -- | -- | -- | 0.109 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.59 | temperature | 20.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 7 | 16.59 | humidity | 90.0 | 90 | > th | dose independent | rect. | 10 | 1 |
| 9 | 16.59 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 10 | 1 |
| 24 | 16.59 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 11 | 1 |
| 30 | 16.59 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 32 | 16.59 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 120 | 19.34 | temperature | 15.0 | 720 | < th | dose independent | rect. | 1 | 1 |
| 121 | 19.34 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 1 | 1 |
| 244 | 20.05 | temperature | 15.0 | 720 | < th | dose independent | sin | 5 | NA |
| 258 | 20.07 | temperature | 15.0 | 720 | < th | dose dependent | sin | 4 | NA |
| 291 | 20.14 | temperature | 15.0 | 720 | > th | dose independent | sin | 6 | NA |
| 296 | 20.15 | temperature | 15.0 | 720 | > th | dose independent | sin | 8 | NA |
| 350 | 20.24 | humidity | 80.0 | 10 | < th | dose independent | rect. | 20 | 12 |
| 358 | 20.25 | humidity | 80.0 | 10 | < th | dose independent | rect. | 18 | 14 |
| 384 | 20.28 | radiation | 20.0 | 270 | < th | dose independent | rect. | 22 | 11 |
| 386 | 20.28 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 16 |
| 390 | 20.28 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 21 | 1 |
| 395 | 20.29 | humidity | 80.0 | 30 | < th | dose independent | rect. | 18 | 5 |
| 409 | 20.30 | radiation | 40.0 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 425 | 20.32 | radiation | 40.0 | 1440 | > th | dose dependent | rect. | 13 | 20 |
| 431 | 20.33 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 21 | 2 |
| 438 | 20.34 | temperature | 20.0 | 30 | > th | dose independent | rect. | 3 | 15 |
| 452 | 20.35 | humidity | 80.0 | 270 | < th | dose independent | rect. | 18 | 1 |
| 453 | 20.35 | temperature | 15.0 | 720 | > th | dose independent | rect. | 22 | 4 |
| 481 | 20.35 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 1 | 17 |
| 485 | 20.36 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 495 | 20.36 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 533 | 20.38 | humidity | 90.0 | 10 | < th | dose independent | rect. | 21 | 2 |
| 538 | 20.38 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 4 | 14 |
| 543 | 20.39 | humidity | 80.0 | 10 | > th | dose independent | rect. | 11 | 1 |
| 608 | 20.41 | humidity | 70.0 | 10 | > th | dose independent | rect. | 18 | 10 |
| 620 | 20.41 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 18 | 1 |
| 669 | 20.43 | temperature | 15.0 | 720 | > th | dose independent | rect. | 23 | 2 |
| 695 | 20.44 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 18 | 9 |
| 718 | 20.45 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 24 | 4 |
| 742 | 20.46 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 751 | 20.46 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 4 | 14 |
| 756 | 20.47 | temperature | 15.0 | 720 | > th | dose independent | sin | 13 | NA |
| 762 | 20.47 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 13 | 6 |
| 772 | 20.47 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 13 | 19 |
| 775 | 20.48 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 13 | 3 |
| 782 | 20.48 | humidity | 80.0 | 30 | < th | dose independent | rect. | 8 | 10 |
| 798 | 20.48 | temperature | 15.0 | 720 | < th | dose dependent | sin | 15 | NA |
| 823 | 20.49 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 24 | 4 |
| 825 | 20.49 | radiation | 10.0 | 1440 | > th | dose dependent | rect. | 17 | 13 |
| 837 | 20.50 | temperature | 30.0 | 270 | < th | dose independent | rect. | 9 | 13 |
| 839 | 20.50 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 17 | 23 |
| 840 | 20.50 | wind | 7.0 | 270 | > th | dose dependent | rect. | 18 | 1 |
| 842 | 20.50 | radiation | 10.0 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 861 | 20.51 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 21 | 1 |
| 862 | 20.51 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 1 | 3 |
| 870 | 20.51 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 17 | 12 |
| 871 | 20.51 | radiation | 20.0 | 10 | < th | dose independent | rect. | 4 | 14 |
| 880 | 20.51 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 18 | 5 |
| 892 | 20.51 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 24 | 11 |
| 904 | 20.52 | wind | 3.0 | 10 | > th | dose independent | rect. | 21 | 2 |
| 905 | 20.52 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 17 | 2 |
| 949 | 20.52 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 10 | 4 |
| 956 | 20.52 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 18 | 13 |
| 959 | 20.52 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 4 | 14 |
| 975 | 20.53 | humidity | 80.0 | 90 | < th | dose independent | rect. | 20 | 7 |