Os07g0217600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os07g0217600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 118.81 | 0.512 | 10.9 | 1.7 | 2.73 | 1.16 | -1.43 | -4.45 | 0.405 | 14.8 | 30.1 | 300 | -- | -- |
| 119.64 | 0.509 | 10.9 | 2.07 | 2.8 | 0.731 | -1.49 | -- | 0.43 | 14.8 | 32 | 514 | -- | -- |
| 125.21 | 0.521 | 10.9 | 1.66 | 2.79 | 1.27 | -- | -5.15 | 0.424 | 14.8 | 30.48 | 589 | -- | -- |
| 126.64 | 0.524 | 10.9 | 2.06 | 2.82 | 0.665 | -- | -- | 0.45 | 14.8 | 31 | 614 | -- | -- |
| 406.75 | 0.939 | 11 | 1.01 | -- | 2.17 | -- | -4.29 | -0.0751 | -- | 28.5 | 239 | -- | -- |
| 129.61 | 0.534 | 10.9 | 2.15 | 2.92 | -- | -1.28 | -- | 0.377 | 15 | -- | -- | -- | -- |
| 135.09 | 0.544 | 10.9 | 2.12 | 2.91 | -- | -- | -- | 0.37 | 15 | -- | -- | -- | -- |
| 402.25 | 0.934 | 10.9 | 1.64 | -- | 1.9 | -- | -- | 0.0638 | -- | 28.17 | 229 | -- | -- |
| 232.26 | 0.71 | 10.9 | -- | 2.68 | 1.05 | -- | -- | 0.206 | 14.6 | 29.9 | 587 | -- | -- |
| 620.67 | 1.16 | 10.9 | 2 | -- | -- | -- | -- | 0.294 | -- | -- | -- | -- | -- |
| 253.8 | 0.745 | 10.9 | -- | 2.87 | -- | -- | -- | 0.133 | 15 | -- | -- | -- | -- |
| 469.41 | 1.01 | 11 | -- | -- | 1.97 | -- | -- | -0.12 | -- | 27.7 | 224 | -- | -- |
| 725.99 | 1.26 | 10.9 | -- | -- | -- | -- | -- | 0.0724 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 112.35 | humidity | 70.0 | 10 | > th | dose independent | rect. | 18 | 12 |
| 3 | 113.78 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 18 | 12 |
| 6 | 114.37 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 23 |
| 10 | 115.48 | temperature | 30.0 | 270 | < th | dose independent | rect. | 16 | 13 |
| 11 | 115.53 | temperature | 30.0 | 270 | < th | dose independent | rect. | 8 | 13 |
| 16 | 115.69 | atmosphere | 1005.0 | 720 | > th | dose independent | rect. | 20 | 4 |
| 22 | 116.05 | humidity | 50.0 | 270 | > th | dose independent | rect. | 8 | 13 |
| 31 | 116.65 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 21 |
| 34 | 116.76 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 16 | 14 |
| 46 | 117.12 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 23 |
| 58 | 117.31 | temperature | 30.0 | 270 | > th | dose independent | sin | 17 | NA |
| 71 | 117.48 | temperature | 30.0 | 720 | < th | dose independent | rect. | 9 | 3 |
| 73 | 117.50 | temperature | 30.0 | 270 | > th | dose independent | rect. | 14 | 5 |
| 87 | 117.50 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 6 | 1 |
| 89 | 117.54 | temperature | 30.0 | 270 | < th | dose independent | sin | 16 | NA |
| 94 | 117.58 | temperature | 30.0 | 720 | > th | dose independent | rect. | 15 | 1 |
| 116 | 117.68 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 20 | 5 |
| 123 | 117.76 | temperature | 30.0 | 270 | > th | dose independent | rect. | 11 | 8 |
| 139 | 117.83 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 159 | 117.91 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 22 | 6 |
| 163 | 117.96 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 22 | 6 |
| 168 | 118.01 | humidity | 90.0 | 30 | > th | dose independent | rect. | 3 | 20 |
| 176 | 118.08 | humidity | 70.0 | 10 | > th | dose independent | rect. | 16 | 14 |
| 183 | 118.12 | temperature | 30.0 | 270 | < th | dose independent | rect. | 14 | 23 |
| 211 | 118.25 | wind | 1.0 | 90 | > th | dose independent | rect. | 23 | 10 |
| 213 | 118.28 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 23 | 3 |
| 217 | 118.30 | temperature | 30.0 | 30 | < th | dose independent | rect. | 10 | 20 |
| 231 | 118.39 | temperature | 30.0 | 720 | < th | dose independent | rect. | 2 | 10 |
| 234 | 118.40 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 16 |
| 241 | 118.44 | humidity | 90.0 | 10 | < th | dose independent | rect. | 2 | 18 |
| 263 | 118.50 | wind | 3.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 264 | 118.50 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 22 | 6 |
| 273 | 118.53 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 23 |
| 276 | 118.55 | humidity | 90.0 | 10 | < th | dose independent | rect. | 24 | 20 |
| 282 | 118.58 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 14 | 1 |
| 291 | 118.63 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 20 | 8 |
| 293 | 118.64 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 18 | 10 |
| 294 | 118.65 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 16 | 13 |
| 295 | 118.66 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 16 | 18 |
| 297 | 118.68 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 18 | 10 |
| 299 | 118.68 | humidity | 60.0 | 270 | > th | dose independent | rect. | 1 | 21 |
| 300 | 118.68 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 20 | 8 |
| 308 | 118.69 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 11 | 19 |
| 345 | 118.80 | wind | 3.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 360 | 118.89 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 7 | 22 |
| 365 | 118.91 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 368 | 118.91 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 372 | 118.95 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 4 | 19 |
| 378 | 118.97 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 379 | 118.98 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 19 | 12 |
| 381 | 118.99 | wind | 7.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 383 | 119.00 | temperature | 30.0 | 270 | > th | dose independent | no | NA | NA |
| 476 | 119.01 | temperature | 30.0 | 270 | < th | dose independent | no | NA | NA |
| 482 | 119.06 | humidity | 70.0 | 90 | < th | dose independent | rect. | 16 | 17 |
| 485 | 119.08 | temperature | 30.0 | 720 | < th | dose independent | rect. | 24 | 13 |
| 487 | 119.09 | humidity | 90.0 | 10 | < th | dose independent | rect. | 24 | 10 |
| 490 | 119.12 | radiation | 1.0 | 90 | < th | dose independent | rect. | 17 | 13 |
| 492 | 119.14 | temperature | 30.0 | 270 | < th | dose independent | rect. | 14 | 8 |
| 494 | 119.15 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 7 | 4 |
| 495 | 119.15 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 12 |
| 498 | 119.15 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 19 | 12 |
| 501 | 119.15 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 19 | 12 |
| 505 | 119.15 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 19 | 12 |
| 507 | 119.15 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 19 | 12 |
| 513 | 119.16 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 525 | 119.21 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 9 | 7 |
| 547 | 119.26 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 16 | 13 |
| 549 | 119.27 | atmosphere | 1005.0 | 270 | > th | dose independent | sin | 10 | NA |
| 553 | 119.29 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 16 | 15 |
| 555 | 119.30 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 14 | 2 |
| 563 | 119.34 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 14 | 2 |
| 594 | 119.41 | temperature | 30.0 | 270 | > th | dose dependent | rect. | 14 | 22 |
| 596 | 119.42 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 605 | 119.46 | wind | 7.0 | 14400 | > th | dose independent | rect. | 16 | 2 |
| 611 | 119.47 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 17 | 16 |
| 614 | 119.47 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 8 | 13 |
| 617 | 119.48 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 19 | 16 |
| 622 | 119.49 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 24 | 11 |
| 640 | 119.52 | temperature | 30.0 | 270 | > th | dose dependent | sin | 15 | NA |
| 656 | 119.53 | temperature | 30.0 | 720 | < th | dose independent | rect. | 24 | 15 |
| 669 | 119.55 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 11 | 15 |
| 671 | 119.56 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 11 | 20 |
| 681 | 119.58 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 20 | 15 |
| 686 | 119.59 | temperature | 15.0 | 720 | > th | dose independent | rect. | 6 | 1 |
| 701 | 119.61 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 19 | 13 |
| 714 | 119.65 | temperature | 30.0 | 720 | > th | dose dependent | sin | 5 | NA |
| 739 | 119.71 | humidity | 50.0 | 30 | > th | dose dependent | sin | 12 | NA |
| 757 | 119.73 | humidity | 70.0 | 90 | > th | dose independent | sin | 12 | NA |
| 762 | 119.74 | humidity | 90.0 | 10 | < th | dose independent | rect. | 24 | 22 |
| 765 | 119.74 | humidity | 80.0 | 90 | < th | dose dependent | sin | 12 | NA |
| 768 | 119.74 | humidity | 70.0 | 270 | < th | dose dependent | rect. | 16 | 17 |
| 786 | 119.78 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 19 | 23 |
| 788 | 119.78 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 11 | 9 |
| 789 | 119.78 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 795 | 119.79 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 836 | 119.82 | humidity | 70.0 | 270 | < th | dose dependent | rect. | 15 | 19 |
| 852 | 119.85 | humidity | 70.0 | 90 | < th | dose independent | sin | 12 | NA |
| 853 | 119.85 | precipitation | 0.1 | 270 | < th | dose independent | sin | 11 | NA |
| 858 | 119.85 | precipitation | 0.1 | 270 | < th | dose dependent | sin | 11 | NA |
| 876 | 119.88 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 16 | 10 |
| 963 | 119.95 | humidity | 50.0 | 720 | > th | dose independent | rect. | 9 | 20 |
| 969 | 119.96 | humidity | 60.0 | 270 | < th | dose independent | sin | 15 | NA |
| 999 | 119.99 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 1 |