Os07g0216700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cereal seed allergen, trypsin/alpha-amylase inhibitor family protein.
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Os07g0216700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cereal seed allergen, trypsin/alpha-amylase inhibitor family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 381.97 | 0.918 | 3.17 | -0.0216 | 0.529 | 1.18 | 0.77 | 7.82 | -0.286 | 3.17 | 48.02 | 241 | -- | -- |
| 389.32 | 0.919 | 3.19 | -0.0957 | 0.466 | 2.62 | 0.268 | -- | -0.287 | 4.24 | 48.51 | 251 | -- | -- |
| 383.57 | 0.912 | 3.18 | -0.0228 | 0.518 | 0.929 | -- | 7.86 | -0.294 | 2.68 | 48.04 | 241 | -- | -- |
| 387.56 | 0.917 | 3.2 | -0.147 | 0.54 | 3.19 | -- | -- | -0.28 | 3.09 | 48.96 | 251 | -- | -- |
| 398.56 | 0.93 | 3.17 | 0.0358 | -- | 0.246 | -- | 8.71 | -0.284 | -- | 49 | 240 | -- | -- |
| 413.44 | 0.953 | 3.21 | 0.0373 | 0.394 | -- | -0.057 | -- | -0.326 | 1.73 | -- | -- | -- | -- |
| 413.46 | 0.952 | 3.21 | 0.0391 | 0.395 | -- | -- | -- | -0.326 | 1.75 | -- | -- | -- | -- |
| 398.69 | 0.93 | 3.2 | -0.106 | -- | 3.84 | -- | -- | -0.297 | -- | 47.41 | 241 | -- | -- |
| 385.2 | 0.914 | 3.21 | -- | 0.477 | 4.1 | -- | -- | -0.303 | 2.47 | 48 | 233 | -- | -- |
| 422.92 | 0.961 | 3.21 | 0.0552 | -- | -- | -- | -- | -0.317 | -- | -- | -- | -- | -- |
| 413.5 | 0.951 | 3.21 | -- | 0.395 | -- | -- | -- | -0.33 | 1.76 | -- | -- | -- | -- |
| 398.98 | 0.93 | 3.2 | -- | -- | 3.77 | -- | -- | -0.286 | -- | 47.69 | 241 | -- | -- |
| 423 | 0.96 | 3.21 | -- | -- | -- | -- | -- | -0.323 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 377.53 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 2 | 377.64 | wind | 7.0 | 14400 | > th | dose independent | rect. | 22 | 3 |
| 3 | 377.68 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 3 |
| 4 | 377.68 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 3 |
| 5 | 378.02 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 16 | 3 |
| 6 | 378.52 | wind | 7.0 | 14400 | < th | dose independent | rect. | 22 | 3 |
| 7 | 378.57 | humidity | 60.0 | 1440 | < th | dose dependent | rect. | 15 | 1 |
| 8 | 378.79 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 16 | 3 |
| 9 | 379.02 | radiation | 1.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 25 | 379.70 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 23 |
| 38 | 380.27 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 52 | 381.44 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 16 | 20 |
| 54 | 381.56 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 12 |
| 60 | 381.88 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 16 | 17 |
| 66 | 382.19 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 24 | 19 |
| 68 | 382.25 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 16 | 14 |
| 74 | 382.46 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 24 | 19 |
| 75 | 382.46 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 24 | 19 |
| 80 | 382.51 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 24 | 19 |
| 92 | 382.79 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 24 | 22 |
| 95 | 382.80 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 21 | 23 |
| 121 | 383.11 | humidity | 50.0 | 270 | < th | dose independent | rect. | 11 | 7 |
| 143 | 383.14 | humidity | 50.0 | 270 | < th | dose dependent | rect. | 11 | 7 |
| 160 | 383.16 | humidity | 50.0 | 270 | < th | dose dependent | sin | 21 | NA |
| 167 | 383.21 | humidity | 50.0 | 270 | < th | dose independent | sin | 20 | NA |
| 168 | 383.21 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 7 | 13 |
| 169 | 383.21 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 7 | 13 |
| 170 | 383.22 | humidity | 50.0 | 270 | > th | dose independent | sin | 23 | NA |
| 171 | 383.22 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 7 | 13 |
| 181 | 383.28 | humidity | 50.0 | 270 | < th | dose dependent | no | NA | NA |
| 326 | 383.31 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 20 |
| 328 | 383.31 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 20 |
| 332 | 383.33 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 16 | 21 |
| 335 | 383.34 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 7 | 23 |
| 340 | 383.39 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 10 | 9 |
| 341 | 383.39 | humidity | 50.0 | 270 | < th | dose dependent | rect. | 17 | 23 |
| 353 | 383.48 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 11 | 8 |
| 356 | 383.48 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 11 | 8 |
| 375 | 383.50 | humidity | 50.0 | 270 | < th | dose independent | rect. | 17 | 23 |
| 379 | 383.56 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 7 | 13 |
| 380 | 383.56 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 10 | 23 |
| 405 | 383.62 | humidity | 50.0 | 270 | < th | dose independent | no | NA | NA |
| 545 | 383.67 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 10 | 20 |
| 550 | 383.69 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 5 | 23 |
| 552 | 383.70 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 22 | 3 |
| 554 | 383.72 | precipitation | 0.1 | 4320 | > th | dose dependent | no | NA | NA |
| 565 | 383.77 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 17 |
| 568 | 383.77 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 17 |
| 605 | 383.88 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 16 | 17 |
| 613 | 383.91 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 15 |
| 615 | 383.91 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 15 |
| 619 | 383.93 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 23 |
| 631 | 383.99 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 15 |
| 651 | 384.07 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 5 | 15 |
| 661 | 384.11 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 10 | 10 |
| 665 | 384.11 | humidity | 60.0 | 1440 | < th | dose dependent | rect. | 13 | 21 |
| 681 | 384.19 | wind | 9.0 | 14400 | < th | dose independent | rect. | 22 | 5 |
| 700 | 384.29 | humidity | 60.0 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 728 | 384.32 | humidity | 60.0 | 1440 | < th | dose dependent | rect. | 13 | 7 |
| 749 | 384.37 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 16 | 14 |
| 759 | 384.39 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 14 |
| 762 | 384.39 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 14 |
| 800 | 384.55 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 14 | NA |
| 818 | 384.65 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 7 | 2 |
| 820 | 384.65 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 7 | 2 |
| 821 | 384.66 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 885 | 384.83 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 906 | 384.84 | humidity | 60.0 | 1440 | < th | dose dependent | sin | 19 | NA |
| 948 | 384.96 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 15 | 19 |
| 953 | 384.97 | humidity | 60.0 | 1440 | < th | dose dependent | rect. | 11 | 8 |
| 969 | 384.98 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 7 | 2 |
| 971 | 384.98 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 976 | 384.99 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 0 | NA |
| 982 | 385.00 | humidity | 50.0 | 270 | > th | dose independent | no | NA | NA |