Os07g0214900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Chalcone synthase C2 (EC 2.3.1.74) (Naringenin-chalcone synthase C2).
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Os07g0214900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Chalcone synthase C2 (EC 2.3.1.74) (Naringenin-chalcone synthase C2).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 936.23 | 1.44 | 12.3 | -4.62 | 2.62 | -5.51 | 5.39 | -6.51 | -1.06 | 10.1 | 74.07 | 1332 | -- | -- |
| 1024.37 | 1.49 | 12.4 | -5.5 | 2.68 | -5.82 | 5.04 | -- | -1.29 | 10 | 74.24 | 1319 | -- | -- |
| 1040.75 | 1.5 | 12.3 | -4.28 | 2.25 | -5.13 | -- | -6.65 | -0.966 | 9.2 | 74.01 | 1444 | -- | -- |
| 1121.41 | 1.56 | 12.4 | -5.38 | 2.85 | -5.82 | -- | -- | -1.29 | 10.4 | 74.39 | 1284 | -- | -- |
| 1322.48 | 1.69 | 12.3 | -4.47 | -- | -5.2 | -- | -6.27 | -0.969 | -- | 74.05 | 1469 | -- | -- |
| 2049.28 | 2.12 | 12.2 | -4.67 | 2.31 | -- | 4.93 | -- | -0.545 | 8.97 | -- | -- | -- | -- |
| 2132.45 | 2.16 | 12.2 | -4.5 | 2.29 | -- | -- | -- | -0.539 | 9.12 | -- | -- | -- | -- |
| 1409.27 | 1.75 | 12.4 | -5.36 | -- | -5.26 | -- | -- | -1.17 | -- | 73 | 1466 | -- | -- |
| 1892.37 | 2.03 | 12.4 | -- | 2.85 | -5.82 | -- | -- | -0.672 | 10.4 | 74.39 | 1284 | -- | -- |
| 2434.65 | 2.31 | 12.3 | -4.51 | -- | -- | -- | -- | -0.527 | -- | -- | -- | -- | -- |
| 2666.3 | 2.42 | 12.1 | -- | 2.29 | -- | -- | -- | -0.0378 | 9.27 | -- | -- | -- | -- |
| 2057.87 | 2.11 | 12.4 | -- | -- | -8.65 | -- | -- | -0.242 | -- | 83 | 1494 | -- | -- |
| 2970.38 | 2.54 | 12.2 | -- | -- | -- | -- | -- | -0.0267 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 953.32 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 9 |
| 4 | 962.11 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 9 |
| 6 | 969.47 | humidity | 80 | 1440 | < th | dose independent | sin | 2 | NA |
| 10 | 975.25 | humidity | 60 | 1440 | > th | dose dependent | sin | 2 | NA |
| 12 | 976.49 | humidity | 80 | 1440 | > th | dose independent | sin | 2 | NA |
| 18 | 979.27 | humidity | 70 | 1440 | > th | dose dependent | rect. | 6 | 9 |
| 28 | 985.06 | humidity | 60 | 1440 | > th | dose dependent | rect. | 4 | 16 |
| 35 | 987.30 | humidity | 90 | 1440 | < th | dose dependent | rect. | 16 | 22 |
| 48 | 988.89 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 20 |
| 77 | 993.66 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 15 |
| 136 | 999.14 | humidity | 50 | 1440 | > th | dose dependent | rect. | 16 | 23 |
| 159 | 1000.50 | humidity | 50 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 219 | 1004.40 | humidity | 50 | 1440 | > th | dose dependent | no | NA | NA |
| 224 | 1004.65 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 15 |
| 256 | 1007.70 | humidity | 90 | 1440 | < th | dose dependent | rect. | 2 | 22 |
| 264 | 1008.21 | humidity | 90 | 1440 | < th | dose dependent | rect. | 22 | 23 |
| 284 | 1008.88 | humidity | 90 | 1440 | < th | dose dependent | no | NA | NA |
| 292 | 1009.38 | humidity | 90 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 319 | 1010.92 | humidity | 90 | 1440 | < th | dose dependent | sin | 4 | NA |
| 355 | 1012.73 | humidity | 70 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 438 | 1017.64 | humidity | 70 | 1440 | > th | dose independent | rect. | 8 | 17 |
| 439 | 1017.66 | humidity | 70 | 1440 | > th | dose independent | rect. | 8 | 19 |
| 442 | 1017.68 | humidity | 70 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 471 | 1018.92 | humidity | 70 | 1440 | > th | dose independent | rect. | 5 | 20 |
| 474 | 1018.94 | humidity | 70 | 1440 | > th | dose independent | rect. | 24 | 21 |
| 475 | 1018.94 | humidity | 70 | 1440 | > th | dose independent | rect. | 5 | 22 |
| 478 | 1018.96 | humidity | 70 | 1440 | > th | dose independent | rect. | 2 | 23 |
| 515 | 1019.08 | humidity | 70 | 1440 | > th | dose independent | no | NA | NA |
| 790 | 1038.62 | humidity | 90 | 1440 | < th | dose dependent | rect. | 2 | 13 |
| 799 | 1039.74 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 23 |
| 809 | 1040.95 | humidity | 70 | 1440 | < th | dose independent | rect. | 18 | 21 |
| 823 | 1041.86 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 844 | 1043.70 | humidity | 70 | 1440 | < th | dose independent | rect. | 14 | 22 |
| 964 | 1053.48 | humidity | 70 | 1440 | < th | dose independent | rect. | 8 | 23 |
| 997 | 1054.46 | humidity | 70 | 1440 | < th | dose independent | no | NA | NA |