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Os07g0211900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF632 domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.93 (0.0191) R2 : 0.417
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.774 (0.0458) R2dC : 0.366 R2C : 0.344
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.268 (0.0402) R2dN8 : 0.0731 R2N8 : 0.0512
σ : 0.36
deviance : 59.33
__
_____
C
peak time of C : 1.11
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
42.45 0.306 8.95 0.406 0.659 -0.482 -0.157 1.08 -0.343 1.5 35.06 1263 -- --
43.91 0.309 8.93 0.528 0.675 -0.41 -0.391 -- -0.295 1.22 71.4 1305 -- --
42.54 0.304 8.95 0.404 0.659 -0.482 -- 1.16 -0.345 1.52 34.55 1262 -- --
44.54 0.311 8.93 0.538 0.673 -0.412 -- -- -0.292 1.34 104.5 1287 -- --
60.7 0.365 8.9 0.629 -- 0.648 -- -0.304 -0.189 -- 34.55 1262 -- --
49.43 0.33 8.92 0.586 0.763 -- -0.341 -- -0.203 1.04 -- -- -- --
49.91 0.331 8.92 0.598 0.764 -- -- -- -0.201 1.08 -- -- -- --
61.08 0.366 8.9 0.641 -- 0.644 -- -- -0.188 -- 34.55 1262 -- --
52.06 0.336 8.95 -- 0.663 -0.485 -- -- -0.365 1.49 168.6 1268 -- --
86.18 0.434 8.9 0.627 -- -- -- -- -0.186 -- -- -- -- --
59.33 0.36 8.93 -- 0.774 -- -- -- -0.268 1.11 -- -- -- --
71.92 0.396 8.92 -- -- 0.637 -- -- -0.26 -- 34.55 1262 -- --
96.55 0.459 8.92 -- -- -- -- -- -0.255 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 41.69 humidity 70 14400 < th dose dependent rect. 21 1
10 42.07 humidity 60 14400 > th dose independent rect. 5 3
11 42.29 atmosphere 1010 90 < th dose independent rect. 20 19
12 42.50 radiation 20 720 < th dose independent rect. 16 16
14 42.74 humidity 60 14400 > th dose independent rect. 3 5
16 42.82 wind 7 4320 > th dose dependent rect. 15 6
17 42.85 radiation 20 4320 > th dose independent rect. 7 1
18 42.85 radiation 20 4320 > th dose dependent rect. 7 1
19 42.88 wind 9 4320 < th dose independent rect. 17 4
20 42.89 wind 7 4320 > th dose dependent rect. 15 4
21 42.92 radiation 30 4320 < th dose independent rect. 7 1
22 42.92 wind 7 4320 > th dose independent rect. 17 2
23 42.93 radiation 20 1440 < th dose dependent rect. 11 1
25 42.95 radiation 20 1440 < th dose independent rect. 11 2
55 43.05 radiation 30 4320 < th dose independent rect. 21 11
60 43.08 humidity 60 14400 < th dose independent rect. 6 1
62 43.08 humidity 60 14400 < th dose independent rect. 20 1
64 43.08 radiation 20 14400 > th dose independent rect. 17 1
65 43.08 wind 1 43200 > th dose independent rect. 2 2
117 43.08 humidity 60 14400 < th dose dependent rect. 6 1
121 43.08 radiation 20 14400 > th dose dependent rect. 17 1
172 43.09 radiation 1 1440 < th dose independent rect. 11 1
173 43.09 radiation 1 1440 < th dose dependent rect. 11 1
176 43.10 radiation 20 1440 < th dose independent rect. 11 22
180 43.12 wind 9 4320 > th dose independent rect. 15 6
183 43.15 radiation 30 4320 < th dose independent rect. 2 6
190 43.22 humidity 60 270 > th dose independent rect. 9 17
191 43.22 wind 7 4320 > th dose dependent rect. 17 2
193 43.23 wind 7 4320 < th dose independent rect. 15 6
194 43.24 radiation 30 4320 < th dose independent rect. 4 4
196 43.25 wind 1 270 < th dose independent rect. 23 1
206 43.29 radiation 40 720 < th dose dependent rect. 16 16
211 43.32 wind 9 4320 > th dose independent rect. 15 4
214 43.32 wind 7 4320 > th dose dependent rect. 15 1
216 43.33 radiation 20 1440 < th dose independent rect. 16 21
217 43.33 wind 1 43200 < th dose dependent rect. 2 1
218 43.34 wind 1 43200 < th dose independent rect. 2 2
222 43.36 radiation 20 1440 < th dose dependent rect. 11 22
234 43.40 radiation 10 1440 > th dose independent rect. 6 7
260 43.47 wind 3 4320 > th dose dependent rect. 24 1
267 43.49 radiation 20 1440 < th dose dependent rect. 16 22
269 43.50 radiation 1 1440 > th dose dependent rect. 11 2
285 43.54 humidity 70 1440 < th dose dependent rect. 11 3
290 43.55 atmosphere 1015 30 < th dose dependent rect. 20 8
307 43.56 atmosphere 1015 30 < th dose dependent rect. 20 19
313 43.57 humidity 60 720 > th dose independent rect. 16 21
320 43.59 radiation 10 1440 < th dose dependent rect. 8 7
321 43.60 radiation 20 720 < th dose independent sin 12 NA
324 43.61 humidity 60 720 > th dose independent rect. 1 14
333 43.64 humidity 60 14400 > th dose independent rect. 1 7
338 43.64 radiation 20 1440 < th dose dependent rect. 6 9
340 43.64 radiation 20 1440 < th dose dependent rect. 22 17
344 43.65 radiation 20 1440 < th dose dependent rect. 2 13
367 43.68 temperature 30 270 < th dose independent rect. 9 17
376 43.69 atmosphere 1010 270 < th dose independent rect. 9 4
397 43.69 radiation 1 1440 > th dose dependent rect. 11 22
402 43.70 atmosphere 1010 90 < th dose independent rect. 9 6
424 43.72 radiation 20 1440 < th dose dependent sin 2 NA
432 43.73 radiation 1 1440 > th dose dependent rect. 16 22
433 43.74 radiation 30 43200 < th dose independent rect. 17 4
436 43.74 radiation 1 1440 > th dose dependent rect. 6 8
479 43.76 radiation 10 1440 > th dose independent sin 6 NA
527 43.77 radiation 20 1440 < th dose dependent rect. 5 22
537 43.78 humidity 70 270 > th dose independent rect. 15 11
563 43.78 radiation 20 1440 < th dose dependent rect. 2 22
572 43.79 radiation 20 1440 < th dose independent rect. 2 12
573 43.79 radiation 20 1440 < th dose independent rect. 23 15
576 43.79 radiation 20 1440 < th dose independent rect. 21 21
578 43.79 radiation 20 1440 < th dose dependent no NA NA
579 43.79 temperature 25 14400 < th dose dependent rect. 12 1
625 43.80 radiation 20 1440 < th dose independent rect. 6 8
626 43.80 radiation 20 1440 < th dose independent rect. 4 10
629 43.80 radiation 20 1440 < th dose independent rect. 6 12
631 43.80 radiation 20 1440 < th dose independent rect. 4 14
633 43.80 radiation 20 1440 < th dose independent rect. 2 16
649 43.80 radiation 20 1440 < th dose independent rect. 6 21
652 43.80 radiation 20 1440 < th dose independent rect. 2 22
657 43.80 radiation 20 1440 < th dose independent rect. 4 23
658 43.80 radiation 20 1440 < th dose independent rect. 6 23
681 43.81 radiation 20 1440 < th dose independent no NA NA
712 43.81 wind 9 4320 < th dose independent rect. 15 18
758 43.82 temperature 20 14400 > th dose independent rect. 12 8
872 43.85 radiation 20 1440 < th dose independent rect. 11 7
878 43.85 radiation 20 1440 < th dose independent rect. 11 16
879 43.85 radiation 20 1440 < th dose independent rect. 11 18
886 43.85 radiation 1 1440 > th dose dependent sin 3 NA
915 43.86 wind 1 270 < th dose independent rect. 17 8
920 43.86 wind 9 4320 < th dose independent rect. 15 13
921 43.86 radiation 20 1440 < th dose independent rect. 11 13
966 43.88 radiation 20 1440 < th dose independent sin 2 NA
983 43.89 wind 9 43200 > th dose independent rect. 14 1
995 43.89 temperature 20 90 > th dose independent rect. 20 19
1000 43.89 humidity 70 1440 < th dose dependent sin 2 NA