Os07g0208600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Remorin, C-terminal region domain containing protein.
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Os07g0208600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Remorin, C-terminal region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 109.2 | 0.491 | 11.1 | -0.0233 | 0.201 | -2.42 | -1.22 | -3.29 | -0.545 | 21.2 | 1.006 | 1429 | -- | -- |
| 114.28 | 0.498 | 11.1 | -0.299 | 0.0238 | -1.66 | -1.32 | -- | -0.483 | 19.7 | 1.524 | 1382 | -- | -- |
| 109.54 | 0.487 | 11.1 | -0.183 | 0.816 | -2.32 | -- | -2.22 | -0.536 | 0.346 | 1.121 | 1555 | -- | -- |
| 111.57 | 0.492 | 11.2 | -0.216 | 0.793 | -2.15 | -- | -- | -0.596 | 0.238 | 2.14 | 1565 | -- | -- |
| 125.55 | 0.522 | 11.2 | -0.058 | -- | -1.72 | -- | -1.42 | -0.586 | -- | 1.225 | 2811 | -- | -- |
| 151.82 | 0.578 | 11.1 | 0.0586 | 0.263 | -- | -0.912 | -- | -0.363 | 21.7 | -- | -- | -- | -- |
| 154.28 | 0.582 | 11.1 | 0.0886 | 0.281 | -- | -- | -- | -0.364 | 23.3 | -- | -- | -- | -- |
| 117.01 | 0.504 | 11.2 | -0.245 | -- | -1.7 | -- | -- | -0.569 | -- | 2.25 | 1388 | -- | -- |
| 112.41 | 0.494 | 11.2 | -- | 0.995 | -2.23 | -- | -- | -0.58 | 0.717 | 2.21 | 1611 | -- | -- |
| 159.21 | 0.59 | 11.1 | 0.0955 | -- | -- | -- | -- | -0.361 | -- | -- | -- | -- | -- |
| 154.49 | 0.581 | 11.1 | -- | 0.282 | -- | -- | -- | -0.374 | 23.3 | -- | -- | -- | -- |
| 118.54 | 0.507 | 11.2 | -- | -- | -1.65 | -- | -- | -0.577 | -- | 2.38 | 1382 | -- | -- |
| 159.45 | 0.589 | 11.1 | -- | -- | -- | -- | -- | -0.372 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 106.26 | radiation | 1 | 1440 | < th | dose dependent | sin | 0 | NA |
| 6 | 107.55 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 19 |
| 7 | 107.64 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 19 |
| 8 | 107.79 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 19 |
| 9 | 107.90 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 13 |
| 10 | 107.90 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 17 | 107.94 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 8 |
| 39 | 108.21 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 23 |
| 46 | 108.25 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 12 |
| 50 | 108.36 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 17 |
| 51 | 108.36 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 20 |
| 57 | 108.38 | radiation | 1 | 1440 | < th | dose dependent | rect. | 21 | 20 |
| 62 | 108.40 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 12 |
| 71 | 108.42 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 15 |
| 104 | 109.02 | radiation | 1 | 1440 | > th | dose independent | rect. | 7 | 23 |
| 106 | 109.08 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 19 |
| 113 | 109.11 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 22 |
| 120 | 109.13 | radiation | 1 | 1440 | < th | dose independent | rect. | 7 | 23 |
| 127 | 109.15 | radiation | 1 | 1440 | > th | dose independent | sin | 23 | NA |
| 133 | 109.21 | radiation | 1 | 1440 | < th | dose independent | sin | 23 | NA |
| 150 | 109.31 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 22 |
| 181 | 109.36 | radiation | 1 | 1440 | < th | dose dependent | no | NA | NA |
| 223 | 109.82 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 8 |
| 236 | 110.02 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 13 |
| 237 | 110.02 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 239 | 110.05 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 8 |
| 311 | 110.74 | radiation | 1 | 1440 | < th | dose dependent | rect. | 16 | 23 |
| 312 | 110.77 | radiation | 1 | 1440 | > th | dose independent | rect. | 7 | 12 |
| 347 | 111.04 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 4 |
| 366 | 111.15 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 19 |
| 371 | 111.17 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 14 |
| 374 | 111.17 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 22 |
| 401 | 111.24 | radiation | 1 | 1440 | < th | dose independent | rect. | 7 | 17 |
| 402 | 111.24 | radiation | 1 | 1440 | < th | dose independent | rect. | 7 | 20 |
| 405 | 111.26 | radiation | 1 | 1440 | > th | dose independent | rect. | 5 | 14 |
| 416 | 111.27 | radiation | 1 | 1440 | < th | dose independent | rect. | 7 | 12 |
| 438 | 111.38 | radiation | 1 | 1440 | < th | dose independent | rect. | 2 | 22 |
| 441 | 111.39 | radiation | 1 | 1440 | < th | dose independent | rect. | 21 | 22 |
| 454 | 111.41 | radiation | 1 | 1440 | < th | dose independent | rect. | 2 | 17 |
| 461 | 111.42 | radiation | 1 | 1440 | < th | dose independent | no | NA | NA |
| 497 | 111.52 | radiation | 1 | 1440 | > th | dose independent | no | NA | NA |
| 625 | 112.41 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 14 |
| 629 | 112.44 | radiation | 1 | 1440 | < th | dose independent | rect. | 16 | 23 |
| 641 | 112.56 | radiation | 1 | 1440 | > th | dose independent | rect. | 16 | 23 |
| 791 | 113.58 | temperature | 25 | 1440 | > th | dose dependent | sin | 17 | NA |
| 809 | 113.76 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 839 | 114.08 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 6 |
| 865 | 114.30 | humidity | 90 | 43200 | < th | dose independent | rect. | 19 | 8 |
| 877 | 114.50 | humidity | 90 | 43200 | < th | dose independent | rect. | 18 | 10 |
| 901 | 114.75 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 965 | 115.22 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 968 | 115.27 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 987 | 115.46 | humidity | 80 | 43200 | > th | dose dependent | rect. | 17 | 8 |
| 990 | 115.48 | temperature | 25 | 1440 | > th | dose dependent | rect. | 23 | 20 |