Os07g0206600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Hexose transporter.
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Os07g0206600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Hexose transporter.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35.16 | 0.279 | 2.84 | 0.0313 | 0.0698 | 2.55 | 0.0328 | 3.54 | 0.031 | 8.76 | 9.3 | 31 | -- | -- |
| 35.56 | 0.278 | 2.84 | 0.011 | 0.0739 | 1.74 | 0.0282 | -- | 0.0298 | 8.39 | 9.349 | 31 | -- | -- |
| 35.16 | 0.276 | 2.84 | 0.0324 | 0.0706 | 2.56 | -- | 3.57 | 0.031 | 8.39 | 9.314 | 31 | -- | -- |
| 35.56 | 0.278 | 2.83 | 0.0132 | 0.0744 | 1.75 | -- | -- | 0.033 | 8.4 | 9.399 | 31 | -- | -- |
| 35.44 | 0.277 | 2.85 | 0.0333 | -- | 2.59 | -- | 3.7 | 0.0315 | -- | 9.343 | 31 | -- | -- |
| 44.35 | 0.312 | 2.84 | -0.0764 | 0.0861 | -- | 0.108 | -- | -0.00167 | 11.2 | -- | -- | -- | -- |
| 44.4 | 0.312 | 2.84 | -0.072 | 0.0856 | -- | -- | -- | -0.00129 | 11.2 | -- | -- | -- | -- |
| 35.87 | 0.279 | 2.84 | 0.0135 | -- | 1.74 | -- | -- | 0.0337 | -- | 9.357 | 31 | -- | -- |
| 35.57 | 0.278 | 2.83 | -- | 0.0745 | 1.74 | -- | -- | 0.0315 | 8.41 | 9.395 | 31 | -- | -- |
| 44.86 | 0.313 | 2.84 | -0.074 | -- | -- | -- | -- | -0.00203 | -- | -- | -- | -- | -- |
| 44.54 | 0.312 | 2.84 | -- | 0.0863 | -- | -- | -- | 0.00673 | 11.2 | -- | -- | -- | -- |
| 35.88 | 0.279 | 2.84 | -- | -- | 1.74 | -- | -- | 0.0321 | -- | 9.396 | 31 | -- | -- |
| 45 | 0.313 | 2.84 | -- | -- | -- | -- | -- | 0.00618 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 33.72 | wind | 9 | 90 | > th | dose dependent | rect. | 11 | 3 |
| 3 | 34.58 | wind | 9 | 90 | > th | dose independent | rect. | 11 | 3 |
| 4 | 34.85 | wind | 9 | 270 | > th | dose dependent | rect. | 11 | 1 |
| 5 | 34.87 | wind | 9 | 30 | > th | dose dependent | rect. | 17 | 21 |
| 42 | 35.59 | wind | 9 | 30 | > th | dose independent | rect. | 17 | 21 |
| 58 | 36.11 | wind | 9 | 30 | > th | dose dependent | sin | 2 | NA |
| 103 | 36.13 | wind | 9 | 30 | > th | dose dependent | sin | 0 | NA |
| 105 | 36.22 | wind | 9 | 270 | > th | dose independent | rect. | 11 | 1 |
| 121 | 36.32 | wind | 9 | 30 | > th | dose independent | rect. | 11 | 7 |
| 124 | 36.44 | wind | 9 | 30 | < th | dose independent | sin | 0 | NA |
| 129 | 36.51 | wind | 9 | 30 | > th | dose independent | sin | 23 | NA |
| 190 | 36.78 | wind | 9 | 10 | > th | dose dependent | rect. | 11 | 7 |
| 290 | 36.95 | wind | 9 | 10 | > th | dose independent | rect. | 13 | 1 |
| 302 | 36.95 | wind | 9 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 378 | 37.03 | wind | 9 | 10 | > th | dose dependent | no | NA | NA |
| 455 | 37.03 | wind | 9 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 592 | 37.17 | wind | 9 | 10 | > th | dose independent | rect. | 13 | 5 |
| 649 | 37.27 | wind | 9 | 30 | > th | dose independent | no | NA | NA |
| 690 | 37.27 | wind | 9 | 30 | > th | dose independent | rect. | 13 | 23 |
| 696 | 37.27 | wind | 9 | 270 | > th | dose dependent | sin | 5 | NA |
| 720 | 37.37 | wind | 9 | 30 | < th | dose independent | no | NA | NA |
| 755 | 37.58 | wind | 9 | 270 | < th | dose independent | sin | 5 | NA |
| 803 | 37.90 | wind | 9 | 270 | > th | dose independent | sin | 4 | NA |
| 824 | 38.03 | radiation | 10 | 270 | < th | dose independent | rect. | 10 | 1 |
| 918 | 38.41 | radiation | 10 | 270 | < th | dose dependent | rect. | 10 | 1 |